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AgeCommit message (Expand)Author
2025-04-08BUG: Provide a tuple, of tuple of floatsFrederick Muriuki Muriithi
2025-04-08Use correct key.Frederick Muriuki Muriithi
2025-04-08Indent code properly.Frederick Muriuki Muriithi
2025-04-08feat: Append GN3 computation completion marker to log file.Alexander_Kabui
2025-04-08fix: Pylint fix for unused variable.Alexander_Kabui
2025-04-07Remove debug logging: current_app.logger requires app context.Frederick Muriuki Muriithi
2025-04-07Log out debug messages separate from active statements.Frederick Muriuki Muriithi
2025-04-07Split the command if its a single, non-json-parseable string.Frederick Muriuki Muriithi
2025-03-27feat: Check for founder and covar file in rqtl2 metadata.Alexander_Kabui
2025-03-21Use HTTPS for LLM endpoint.Munyoki Kilyungi
2025-03-18Order species by species id.Munyoki Kilyungi
2025-03-07Merge pull request #218 from genenetwork/chores/refactor-qtl2-scriptAlexander Kabui
2025-03-07refactor function to process scan1 results.Alexander_Kabui
2025-03-07Convert wikiId and versionId to ints.Munyoki Kilyungi
2025-03-07Revert "fix: Replace file path fetching code in rqtl2.py with current_app.roo...Munyoki Kilyungi
2025-03-04Use self-holsted LLM API end-point.Munyoki Kilyungi
2025-03-04fix: Replace file path fetching code in rqtl2.py with current_app.root_pathMunyoki Kilyungi (aider)
2025-02-28Eliminate carriage-return and newline characters.Frederick Muriuki Muriithi
2025-02-28Print out the stack trace to help debug failures.Frederick Muriuki Muriithi
2025-02-28Fix issues caught by mypy.Frederick Muriuki Muriithi
2025-02-28Fix linting errors.Frederick Muriuki Muriithi
2025-02-26feat: Add utility function for reading files and improve loggingAlexander_Kabui
2025-02-25fix: handle extra columns in permutations CSV reader to prevent unpacking error.Alexander_Kabui
2025-02-24Fetch rscript from os env if it isn't set in the app's config.Munyoki Kilyungi
2025-02-21Fix versioning of WIKI entries.Munyoki Kilyungi
2025-02-20refactor: Skip permutation test when NO_OF_PERMUTATION less than 0.Alexander_Kabui
2025-02-19fix: Read and parse correct permutation file from R/qtl2.Alexander_Kabui
2025-02-19fix: Read and parse correct permutation file from R/qtl1Alexander_Kabui
2025-02-10feat: Add LMDB sample data retrieval API endpoint with testsMunyoki Kilyungi (aider)
2025-02-07refactor: Add rqtl2 default method and update unittests.Alexander_Kabui
2025-02-07feat: Add the qtl to method to be used.Alexander_Kabui
2025-02-07feat: Enable streaming functionality for rqtl2.Alexander_Kabui
2025-02-07fix: fix for fetching significance results.Alexander_Kabui
2025-02-06refactor: code refactoring.Alexander_Kabui
2025-02-06feat: Include the physical map position in results.Alexander_Kabui
2025-02-06refactor: Rename pheno_map to physical_map .Alexander_Kabui
2025-02-06mypy fixes.Alexander_Kabui
2025-02-06feat: Add functionality to process output to compute endpoint.Alexander_Kabui
2025-02-06refactor process qtl2 results function to include output reading.Alexander_Kabui
2025-02-06feat: Add function to process qtl2 output results.Alexander_Kabui
2025-02-06feat: Add function to process qtl scan results.Alexander_Kabui
2025-02-06feat: Add function to process permutation results.Alexander_Kabui
2025-02-06feat: Add function to fetch significance results.Alexander_Kabui
2025-02-06Refactor: return the relative file to the workspace directory.Alexander_Kabui
2025-02-06Minor fix.Alexander_Kabui
2025-02-06Refactor workspace directory creation to use pathlib's mkdir method.Alexander_Kabui
2025-02-06refactor: Minor cleanup.Alexander_Kabui
2025-02-06refactor: Refactor run_process function.Alexander_Kabui
2025-02-06refactor: Add file_path to output only if it is created.Alexander_Kabui
2025-02-06refactor: Check if data before attempting write operation.Alexander_Kabui
generated by cgit-pink 1.4.1 (git 2.36.1) at 2025-12-27 18:17:31 +0000