aboutsummaryrefslogtreecommitdiff
path: root/gn3/computations
AgeCommit message (Expand)Author
2022-12-21gn3: (gn3.random -> gn3.chancy): Rename module to avoid conflicts.Frederick Muriuki Muriithi
2022-12-06mypy and pylint fixesAlexander_Kabui
2022-12-02correlations: return `None` rather than zero for missing lit corrsFrederick Muriuki Muriithi
2022-11-29remove trailing whitespaceAlexanderKabui
2022-11-29remove unused function parameterAlexanderKabui
2022-11-08Fix issue where only primary samples were used when all samples arezsloan
2022-10-22fix issue;parsing sample data (#102)Alexander Kabui
2022-10-06DEBUG: Collect more info for debuggingFrederick Muriuki Muriithi
2022-10-06DEBUG: Collect more information on possible failure.Frederick Muriuki Muriithi
2022-10-03Bug: Do not process data for output too earlyFrederick Muriuki Muriithi
2022-09-30Add escape char to avoid error notice.Frederick Muriuki Muriithi
2022-09-29Use the built-in csv module for file outputFrederick Muriuki Muriithi
2022-08-25revert for commit 6db3b2af8fc09999996d3acc09890a06f179c669;BugAlexander_Kabui
2022-08-12Add mandatory/expected fields to parsed data.Frederick Muriuki Muriithi
2022-08-10Fix returned value for 'parse_correlation_output'Frederick Muriuki Muriithi
2022-08-10code refactoringFrederick Muriuki Muriithi
2022-08-10remove unnecessary parsing of floatsAlexander_Kabui
2022-08-10code refactoringFrederick Muriuki Muriithi
2022-08-10remove unnecessary parsing of floatsAlexander_Kabui
2022-08-10enhancements for rust tissueFrederick Muriuki Muriithi
2022-08-10pylint fixesAlexander_Kabui
2022-08-10code refactoringAlexander_Kabui
2022-08-10remove unnessary codeAlexander_Kabui
2022-08-10remove unnecessary parsing of floatsAlexander_Kabui
2022-08-10merge for resultsAlexander_Kabui
2022-08-10enhancements for rust tissueAlexander_Kabui
2022-08-03Refactor: Remove unnecessary whitespace and nameFrederick Muriuki Muriithi
2022-08-03Refactor: Remove unnecessary iterations and nameFrederick Muriuki Muriithi
2022-07-29Fix failing testsFrederick Muriuki Muriithi
2022-07-28Update sample correlations code to use multiprocessingFrederick Muriuki Muriithi
2022-07-22mypy fixesAlexander_Kabui
2022-07-22pep8 fixesAlexander_Kabui
2022-07-22linting and tests fixesAlexander_Kabui
2022-07-22compute num overlapAlexander_Kabui
2022-07-22fix for bug splitting list dataAlexander_Kabui
2022-07-22minor fixes for parsing dataAlexander_Kabui
2022-07-22code to parse tissue correlation inputAlexander_Kabui
2022-07-22mypy pylint fixesAlexander_Kabui
2022-07-22code to fetch correct sample corr dataAlexander_Kabui
2022-07-22delete dead_code;rename variablesAlexander_Kabui
2022-07-22minor fixesAlexander_Kabui
2022-06-29use explicit parametersAlexander_Kabui
2022-06-29fix issuesAlexander_Kabui
2022-06-29pylint fixesAlexander
2022-06-29minor fixesAlexander
2022-06-29handle tmp files generationAlexander
2022-06-29parse output dataAlexander
2022-06-29pep8 formattingAlexander
2022-06-29init rust correlation moduleAlexander
2022-05-30Pass trait data as args to `fix_strains` and fix some bugsFrederick Muriuki Muriithi
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-21 20:40:17 +0000