genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2022-12-22	auth: implement OAuth2 flow.oauth2_auth_flow	Frederick Muriuki Muriithi
2022-12-21	auth: oauth2: users: Add expected property	Frederick Muriuki Muriithi
2022-12-21	auth: Add default row_factory to sqlite3	Frederick Muriuki Muriithi
2022-12-21	Enable authentication	Frederick Muriuki Muriithi
2022-12-21	gn3: (gn3.random -> gn3.chancy): Rename module to avoid conflicts.	Frederick Muriuki Muriithi
2022-12-12	auth: functions to get user resources	Frederick Muriuki Muriithi
2022-12-12	auth: Add a way to check whether a user is a group leader	Frederick Muriuki Muriithi
2022-12-12	auth: pass cursor object to `user_group` function	Frederick Muriuki Muriithi
2022-12-12	auth: Attach group to GroupRole, rather than group_id	Frederick Muriuki Muriithi
2022-12-08	Remove unused import	Frederick Muriuki Muriithi
2022-12-08	auth: test for `user_resources` function (incomplete)	Frederick Muriuki Muriithi
2022-12-08	tests: Fix issues caught by tests	Frederick Muriuki Muriithi
2022-12-08	auth: add test to retrieve public resources	Frederick Muriuki Muriithi
2022-12-08	auth: add function to retrieve a user's group	Frederick Muriuki Muriithi
2022-12-06	Use a dataset's name to fetch it's metadata from RDF	Munyoki Kilyungi
2022-12-06	mypy and pylint fixes	Alexander_Kabui
2022-12-02	correlations: return `None` rather than zero for missing lit corrs	Frederick Muriuki Muriithi
2022-11-29	remove trailing whitespace	AlexanderKabui
2022-11-29	remove unused function parameter	AlexanderKabui
2022-11-28	Catch a URLError when virtuoso isn't running at all	Munyoki Kilyungi
2022-11-28	Fix pylint errors	Munyoki Kilyungi
2022-11-28	Fail gracefully when virtuoso is not accessible	Munyoki Kilyungi
2022-11-24	auth: Check for authentication and fix errors	Frederick Muriuki Muriithi
2022-11-24	auth: Implement `create_resource` function	Frederick Muriuki Muriithi
2022-11-24	auth: Define base exceptions	Frederick Muriuki Muriithi
2022-11-24	tests: Add test for `create_resource`	Frederick Muriuki Muriithi
2022-11-23	Create a new REST endpoint for fetching a phenotype's metadata	Munyoki Kilyungi
2022-11-21	auth: Prevent group leader from being a member of multiple groups	Frederick Muriuki Muriithi
2022-11-17	auth: Finish implementation of `create_group_role`	Frederick Muriuki Muriithi
2022-11-17	auth: Define the `User` type	Frederick Muriuki Muriithi
2022-11-16	auth: fix bugs in the code	Frederick Muriuki Muriithi
2022-11-16	Inject SPARQLWrapper as a parameter	Munyoki Kilyungi
2022-11-15	auth: Add `create_group_role` function.	Frederick Muriuki Muriithi
2022-11-15	auth: Return results of calling function directly	Frederick Muriuki Muriithi
2022-11-15	auth: Specify types for privileges, roles, groups	Frederick Muriuki Muriithi
2022-11-15	auth: Add some typing information to the functions	Frederick Muriuki Muriithi
2022-11-15	auth: Reorganise package - move function to `checks` module	Frederick Muriuki Muriithi
2022-11-15	pylint: Fix linting errors.	Frederick Muriuki Muriithi
2022-11-14	auth: Implement `create_group`	Frederick Muriuki Muriithi
2022-11-14	auth: Add test for `create_group`	Frederick Muriuki Muriithi
2022-11-10	Migrations: Add migration for 'resources' table	Frederick Muriuki Muriithi
2022-11-08	Fix issue where only primary samples were used when all samples are	zsloan
2022-11-08	Tests: Generalise testing 'CREATE TABLE' migrations	Frederick Muriuki Muriithi
2022-11-08	Settings: Provide default `AUTH_DB` setting.	Frederick Muriuki Muriithi
2022-11-08	Tests: Tests the credentials check system	Frederick Muriuki Muriithi
2022-11-03	Add credentials checking	Frederick Muriuki Muriithi
2022-11-03	Initialise the Auth(entic\|oris)ation packages	Frederick Muriuki Muriithi
2022-11-02	Re-implement RDF related code to use monads in its own module	Munyoki Kilyungi
2022-11-02	Fix pylint and mypy errors	Munyoki Kilyungi
2022-10-28	Use Xapian index path from app settings.	Arun Isaac