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GeneNetwork3 REST API for data science and machine learning
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gemma.py
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Author
2024-09-12
Move assert_paths_exist into fs_helpers
Pjotr Prins
2024-09-12
Change behavior of do_paths_exist to actually throw useful error
Pjotr Prins
2023-10-27
Remove reimport "Optional".
Munyoki Kilyungi
2023-10-27
Make implicit optional type hints PEP 484 compliant.
Munyoki Kilyungi
2023-10-26
Fix errors caught by mypy.
Frederick Muriuki Muriithi
2022-02-24
gn3: Explicitly specify UTF-8 to be the file encoding.
Arun Isaac
2021-05-13
Rename file_utils to fs_helpers
BonfaceKilz
2021-03-10
Fix k-compute command when "loco" is true
BonfaceKilz
2021-03-08
Remove unused imports
BonfaceKilz
2021-03-08
Delete "generate_gemma_computation_cmd"
BonfaceKilz
2021-03-08
Add generic fn for computing k and gwa values
BonfaceKilz
2021-03-08
Apply pep-8 formatting
BonfaceKilz
2021-03-08
Move "generate_random_n_string" to file_utils
BonfaceKilz
2021-03-08
Fix failing tests
BonfaceKilz
2021-02-24
Create a new helper function for generating k_values and GWA
BonfaceKilz
2021-02-24
Add procedure that checks whether a list of paths exist
BonfaceKilz
2021-02-24
Check if phenotype exists before creating one
BonfaceKilz
2021-02-24
Add new procedure that computes the hash of an array of strings
BonfaceKilz
2021-02-24
Add mypy-typing to function
BonfaceKilz
2021-02-24
Append random 6 chars to generated phenotype file
BonfaceKilz
2021-02-24
Create a new method for generating a valid phenotype file on the fly
BonfaceKilz