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genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2024-09-12
README
Pjotr Prins
2024-09-12
assert_paths_exist: make throw_error optional
Pjotr Prins
2024-09-12
Move assert_paths_exist into fs_helpers
Pjotr Prins
2024-09-12
Change behavior of do_paths_exist to actually throw useful error
Pjotr Prins
2024-09-12
Make the gnqa search endpoint a get request.
Alexander_Kabui
2024-09-11
Minor typo fix.
Alexander_Kabui
2024-09-11
Update docs on use for custom request when query fahamu Api.
Alexander_Kabui
2024-09-11
Update SPARQL queries to fetch from graph with a default value.
Munyoki Kilyungi
2024-09-11
Handle case when result is empty when sanitizing json-ld result.
Munyoki Kilyungi
2024-09-11
Replace format-string with f-strings.
Munyoki Kilyungi
2024-09-11
Fix mypy errors.
Munyoki Kilyungi
2024-09-11
Run python-black against file.
Munyoki Kilyungi
2024-09-11
Add test cases for wiki.__sanitize_result.
Munyoki Kilyungi
2024-09-11
Move comment on the manual sort to the doc-string.
Munyoki Kilyungi
2024-09-11
Abstract out sanitizing json-ld result into a function.
Munyoki Kilyungi
2024-09-11
Update RDF queries to match ADR/000/gn-transform-databases.
Munyoki Kilyungi
2024-09-06
Modify endpoint to use query string.
Alexander_Kabui
2024-09-06
Merge pull request #188 from genenetwork/chores/merge-gnqa-api
Alexander Kabui
2024-09-05
Update comment explaining why CONSTRUCT doesn't respect ORDER BY.
Munyoki Kilyungi
2024-09-05
Correctly get categories in response.
Munyoki Kilyungi
2024-09-05
Sort the RIF history data in reverse order.
Munyoki Kilyungi
2024-09-05
Enforce array type to "categories" and "pmids" fields.
Munyoki Kilyungi
2024-09-05
Set OPTIONAL values to default to an empty string.
Munyoki Kilyungi
2024-09-05
Rename "pubmed_id" -> "pubmed_ids" to be explicit it's an array.
Munyoki Kilyungi
2024-09-05
Remove type from wiki history.
Munyoki Kilyungi
2024-09-05
Fix type error.
Munyoki Kilyungi
2024-09-05
Use the correct header to request json-ld data.
Munyoki Kilyungi
2024-09-05
Add comment history.
Munyoki Kilyungi
2024-09-05
Always output the top-level graph when compacting.
Munyoki Kilyungi
2024-09-05
Use correct prefix when querying for email in triple.
Munyoki Kilyungi
2024-09-05
Create global wiki context usable by all functions in gn3.rdf.wiki
Munyoki Kilyungi
2024-09-05
Ignore type error and add a FIXME stub.
Munyoki Kilyungi
2024-09-05
Add missing doc-strings to make pylint pass.
Munyoki Kilyungi
2024-09-05
Restructure RDF module.
Munyoki Kilyungi
2024-09-05
Sort previos records by datetime.
Alexander_Kabui
2024-09-05
Apply pep8 formatting.
Alexander_Kabui
2024-09-05
Create new endpoints for fetching user previous records.
Alexander_Kabui
2024-09-03
Make pylint fixes.
Alexander_Kabui
2024-09-03
Add tests for fetching and populating references.
Alexander_Kabui
2024-09-03
Add unittests for formatting bib info.
Alexander_Kabui
2024-09-03
Remove unused imports.
Alexander_Kabui
2024-09-03
Use Jsonb for storing results.
Alexander_Kabui
2024-09-03
Raise KeyError for doc_id not found in doc_ids.
Alexander_Kabui
2024-09-02
Remove redundant function for fetching data with task_id.
Alexander_Kabui
2024-09-02
Modify default backoff_factor for adapter.
Alexander_Kabui
2024-09-02
Add docs for custom request method.
Alexander_Kabui
2024-09-02
Rename task_id to task_object.
Alexander_Kabui
2024-09-02
Refactor doc_id object.
Alexander_Kabui
2024-09-02
Remove unecessary check for open file.
Alexander_Kabui
2024-09-02
Fix minor syntax issue.
Alexander_Kabui
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