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Authentication should be handled by the auth server (gn-auth) and thus, this
commit removes code handling user authentication from the GN3 system.
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* gn3/auth/authentication/oauth2/models/oauth2token.py
(introspect_token, check_permission): Delete "pylint:
disable=[no-self-use]". R0022: Useless option value for 'disable',
'no-self-use' was moved to an optional extension, see
https://pylint.pycqa.org/en/latest/whatsnew/2/2.14/summary.html#removed-checkers.
* gn3/auth/authentication/oauth2/grants/authorisation_code_grant.py
(delete_authorization_code): Ditto.
* tests/unit/test_heatmaps.py (test_cluster_traits):
Delete "pylint: disable=R0201". R0022: Useless option value for
'disable', 'no-self-use' was moved to an optional extension, see
https://pylint.pycqa.org/en/latest/whatsnew/2/2.14/summary.html#removed-checkers.
* tests/unit/computations/test_partial_correlations.py
(test_tissue_correlation): Ditto.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
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Implement the "Authorization Code Flow" for the authentication of users.
* gn3/auth/authentication/oauth2/grants/authorisation_code_grant.py: query and
save the authorisation code.
* gn3/auth/authentication/oauth2/models/authorization_code.py: Implement the
`AuthorisationCode` model
* gn3/auth/authentication/oauth2/models/oauth2client.py: Fix typo
* gn3/auth/authentication/oauth2/server.py: Register the
`AuthorisationCodeGrant` grant with the server.
* gn3/auth/authentication/oauth2/views.py: Implement `/authorise` endpoint
* gn3/templates/base.html: New HTML Templates of authorisation UI
* gn3/templates/common-macros.html: New HTML Templates of authorisation UI
* gn3/templates/oauth2/authorise-user.html: New HTML Templates of
authorisation UI
* main.py: Allow both "code" and "token" response types.
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* gn3/auth/authentication/oauth2/grants/password_grant.py: Return user rather
than boolean
* gn3/auth/authentication/oauth2/models/oauth2client.py: provide optional
`user` argument to allow flexibility in setting up the client's user
* gn3/auth/authentication/oauth2/models/oauth2token.py: Set token and client
user correctly
* gn3/auth/authentication/oauth2/server.py: Set token user from the request
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Add code to implement the OAuth2 flow.
* Add test fixtures for setting up users and OAuth2 clients
* Add tests for token generation with the "Password Grant" flow
* Fix some issues with test due to changes in the database connection's
row_factory
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