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path: root/gn3/api/metadata.py
AgeCommit message (Expand)Author
2024-08-26Run autopep8 against file.Munyoki Kilyungi
2024-08-26refactor: split out utlities into their modules and change api to use metadataJohn Nduli
2024-05-20Delete search endpoints for datasets/publications.Munyoki Kilyungi
2024-04-30Add docstring to view_history function.Munyoki Kilyungi
2024-04-30Use JWT tokens from gn-auth.Munyoki Kilyungi
2024-04-30Add an endpoint to query a dataset's git history from it's id.Munyoki Kilyungi
2024-04-30Rename retrieve_dataset_metadata to retrieve_metadata.Munyoki Kilyungi
2024-02-15Use correct names for dataset entries in json result.Munyoki Kilyungi
2024-02-14Remove try ... except clauses around RDF endpoints.Munyoki Kilyungi
2024-02-14Stem the dataset's id before constructing the path.Munyoki Kilyungi
2024-02-13Use correct path for dataset metadata files.Munyoki Kilyungi
2024-02-13Update "dataset/<name>" API endpoint to fetch metadata from files.Munyoki Kilyungi
2024-01-10Optionally fetch dataset metadata if provided during genotype fetch.Munyoki Kilyungi
2024-01-10Switch to gnt:belongsToSpecies in genotype queries.Munyoki Kilyungi
2024-01-10Remove hard-coded dataset name.Munyoki Kilyungi
2024-01-08Optionally fetch dataset metadata if provided during probeset fetch.Munyoki Kilyungi
2024-01-06Remove extra gene metadata from query as it's un-necessary.Munyoki Kilyungi
2024-01-06Add extra keys to the Probeset's json-ld context.Munyoki Kilyungi
2024-01-06Refactor gene symbol handling and add references to probeset.Munyoki Kilyungi
2024-01-06Use gnt:geneSymbol property to fetch genes in Probeset RDF query.Munyoki Kilyungi
2023-12-15Update RDF ProbeSet query.Munyoki Kilyungi
2023-12-15First frame and then compact probeset results.Munyoki Kilyungi
2023-12-15Update ProbeSet's context.Munyoki Kilyungi
2023-12-15Update BASE_CONTEXT entries.Munyoki Kilyungi
2023-12-07Fix typo in GoTree prefix.Munyoki Kilyungi
2023-12-07Add optional property for platform info in dataset representation.Munyoki Kilyungi
2023-12-07Fetch normalization metadata correctly.Munyoki Kilyungi
2023-12-07Fix typo in platform prefix.Munyoki Kilyungi
2023-12-07Refactor metadata mappings for improved dataset representation.Munyoki Kilyungi
2023-12-07Update phenotype queries to use gnt:belongsToGroup.Munyoki Kilyungi
2023-11-30Add a phenotype's chromosome location to the Phenotype fetch.Munyoki Kilyungi
2023-11-30Place publication details on a sub-graph of its own.Munyoki Kilyungi
2023-11-30Replace LRS with lodScore.Munyoki Kilyungi
2023-11-27Remove unused variable "args".Munyoki Kilyungi
2023-11-27Attach phenotype endpoints to one function.Munyoki Kilyungi
2023-11-27Use "dcat:Dataset" when framing when fetching phenotypes.Munyoki Kilyungi
2023-11-27Construct a more semantic graph for phenotypes.Munyoki Kilyungi
2023-11-27Remove unused argument during template substitution.Munyoki Kilyungi
2023-11-27Replace "ex:" prefix with a semantic prefix when fetching phenotype.Munyoki Kilyungi
2023-11-27Add "gnt:abbreviation" and "ex:inbredSet" to PHENOTYPE_CONTEXT.Munyoki Kilyungi
2023-11-27Add "ex:species" to phenotypes json-ld context.Munyoki Kilyungi
2023-11-27Return distinct results after a dataset search.Munyoki Kilyungi
2023-11-27Add ex:pages and ex:hits to the search context.Munyoki Kilyungi
2023-11-27First fram and compact the jsonld results during dataset search.Munyoki Kilyungi
2023-11-27Add "inbredSet" to the dataset's search context.Munyoki Kilyungi
2023-11-27Fetch a dataset's contributors in RDF.Munyoki Kilyungi
2023-11-27Fetch dataset specifics in RDF.Munyoki Kilyungi
2023-10-27Refactor to use new rdf.query_* abstractions.Munyoki Kilyungi
2023-10-27Fix pylint error.Munyoki Kilyungi
2023-10-27Refactor to use new rdf.query_* abstractions.Munyoki Kilyungi
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