genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2024-10-02	Move sparql-auth URIs to gn3-conf in documentation.	Munyoki Kilyungi
2024-10-02	Add all rdf-tests to GN3 CI.	Munyoki Kilyungi
2024-10-02	Spin up a local virtuoso instance to run RDF tests against.	Munyoki Kilyungi
2024-10-02	Add virtuoso ini file to be used during testing.	Munyoki Kilyungi
2024-10-02	Set a default password for sparql.	Munyoki Kilyungi
2024-09-30	chore: pylint code fix	John Nduli
2024-09-30	feat: rollback mysql transaction when rdf insert fails	John Nduli
2024-09-30	fix: rdf and sql queries for fetching rif data	John Nduli
2024-09-28	Update documentation on how to run tests.	Frederick Muriuki Muriithi
2024-09-28	Lint: fix some linting errors.	Frederick Muriuki Muriithi
2024-09-27	Debug command.	Frederick Muriuki Muriithi
2024-09-27	Skip failing test.	Frederick Muriuki Muriithi
2024-09-27	Bug: Use absolute paths in place of relative paths.	Frederick Muriuki Muriithi
2024-09-27	Fix Pair-Scan output paths	Frederick Muriuki Muriithi
2024-09-27	Set `include_package_data=True` to install R files too.	Frederick Muriuki Muriithi
2024-09-27	Add a MANIFEST.in to include R scripts.	Frederick Muriuki Muriithi
2024-09-27	Bug: Use absolute path in place of relative path	Frederick Muriuki Muriithi
2024-09-27	Use existing fixture to retrieve settings.	Frederick Muriuki Muriithi
2024-09-27	Fix R/qtl output paths	zsloan
2024-09-23	Revert "Add pytest.mark.unit_test for all rdf test-cases."	Munyoki Kilyungi
2024-09-23	Add pytest.mark.unit_test for all rdf test-cases.	Munyoki Kilyungi
2024-09-23	Handle missing GN3_SECRETS for CI testing.	Munyoki Kilyungi
2024-09-23	Fix or ignore pylint errors.	Munyoki Kilyungi
2024-09-23	Revert "Remove one-line if/else statement."	Munyoki Kilyungi
2024-09-23	Add section on setting up virtuoso locally.	Munyoki Kilyungi
2024-09-23	Update docs to use default virtuoso ports.	Munyoki Kilyungi
2024-09-23	Update docs on how to use SPARQL default ports.	Munyoki Kilyungi
2024-09-23	Remove one-line if/else statement.	Munyoki Kilyungi
2024-09-23	Load GN3_SECRETS after loading GN3_CONF settings.	Munyoki Kilyungi
2024-09-23	Remove dead comment.	Munyoki Kilyungi
2024-09-23	Make sure the the test graph is empty before running rdf tests.	Munyoki Kilyungi
2024-09-23	Update docs to highlight sparql conf params in SECRETS file.	Munyoki Kilyungi
2024-09-23	Use correct object modifier for a label when inserting a comment.	Munyoki Kilyungi
2024-09-23	Update docstring for "update_wiki_comment".	Munyoki Kilyungi
2024-09-23	Use correct object modifier in triple when fetching comment history.	Munyoki Kilyungi
2024-09-23	Use test fixtures to set-up a test named graph.	Munyoki Kilyungi
2024-09-23	Add RDF test cases.	Munyoki Kilyungi
2024-09-23	Use correct modifier when getting species name in SPARQL.	Munyoki Kilyungi
2024-09-23	Remove dead variable from RDF query.	Munyoki Kilyungi
2024-09-23	Alphabetically sort the categories and pubmed_ids array.	Munyoki Kilyungi
2024-09-23	Remove un-necessary triple in comment history RDF query.	Munyoki Kilyungi
2024-09-19	Use correct return type.	Munyoki Kilyungi
2024-09-19	Remove extraneous keyword.	Munyoki Kilyungi
2024-09-18	Pass in insert_dict instead of payload in "get_wiki_entries".	Munyoki Kilyungi
2024-09-18	Pass in the createtime as an arg when inserting into RDF graph.	Munyoki Kilyungi
2024-09-18	Get the next versionId from SQL.	Munyoki Kilyungi
2024-09-18	Update docs with extra conf vars for updating virtuoso.	Munyoki Kilyungi
2024-09-18	Update "POST /wiki/comment_id/edit" to have RDF edits.	Munyoki Kilyungi
2024-09-18	Fix typo.	Munyoki Kilyungi
2024-09-18	Add method that inserts new RIF comments.	Munyoki Kilyungi