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| author | Munyoki Kilyungi | 2024-09-17 18:35:57 +0300 |
|---|---|---|
| committer | John Nduli Kilyungi | 2024-09-18 08:32:34 +0300 |
| commit | 0131996686e8cc34ab698212f2da879af0dea71c (patch) | |
| tree | e46926b1810d5b707e19922c57d22933d7c8a799 | |
| parent | 92b4f53505d53da2e5a163d5bb94dc7ef75b27ae (diff) | |
| download | genenetwork3-0131996686e8cc34ab698212f2da879af0dea71c.tar.gz | |
Update docs with extra conf vars for updating virtuoso.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| -rw-r--r-- | README.md | 4 |
1 files changed, 4 insertions, 0 deletions
@@ -124,6 +124,10 @@ These configurations should be set in an external config file, pointed to with t - SPARQL_ENDPOINT (ex: "http://localhost:9082/sparql") - XAPIAN_DB_PATH (ex: "/export/data/genenetwork/xapian") - TMPDIR +- SPARQL_USER +- SPARQL_ENDPOINT (ex: "http://localhost:9082/sparql-auth/") +- SPARQL_PASSWORD +- SPARQL_AUTH_URI TMPDIR also needs to be set correctly for the R script(s) because they pass results on as files on the local system (previously there was an issue with it being set to /tmp instead of ~/genenetwork3/tmp). Note that the Guix build system should take care of the paths. |