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genenetwork3
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auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2025-11-11
Use correct directory for gn3 tests.
HEAD
main
Munyoki Kilyungi
2025-11-11
Revert "Test build with only guix-bioinformatics."
Munyoki Kilyungi
2025-11-11
Test build with only guix-bioinformatics.
Munyoki Kilyungi
2025-11-11
Update gn3 channels file.
Munyoki Kilyungi
2025-10-27
Improve logging for the asynchronous background tasks.
Frederick Muriuki Muriithi
2025-10-27
Pass `TEXTDIR` configuration on to the script.
Frederick Muriuki Muriithi
2025-10-27
Enable logging in `gn3.db.menu` module.
Frederick Muriuki Muriithi
2025-10-22
typing: Fix type errors.
Frederick Muriuki Muriithi
2025-10-22
Remove mock for no-longer existing attribute.
Frederick Muriuki Muriithi
2025-10-22
Fetch configs from app setting and pass them down
Frederick Muriuki Muriithi
2025-10-15
Configurations: Use non-executable file for settings.
Frederick Muriuki Muriithi
2025-10-06
flask-cors: Remove minimum version pinning.
Frederick Muriuki Muriithi
2025-09-10
.guix-channel: Point guix-past to codeberg.
Munyoki Kilyungi
2025-09-10
Fix pylint failing tests.
Munyoki Kilyungi
2025-08-13
Initialise logging formats.
Frederick Muriuki Muriithi
2025-08-13
Improve logging by setting up handlers appropriately for each env.
Frederick Muriuki Muriithi
2025-08-13
Remove unused dependency.
Frederick Muriuki Muriithi
2025-08-12
Typo: Fix variable names.
Frederick Muriuki Muriithi
2025-08-12
Setup module-specific loggers.
Frederick Muriuki Muriithi
2025-08-06
Change order of query parameters.
Frederick Muriuki Muriithi
2025-08-06
Use default `quotechar=None`.
Frederick Muriuki Muriithi
2025-08-03
Fix mypy errors.
Munyoki Kilyungi
2025-08-03
Fix linting errors.
Munyoki Kilyungi
2025-07-17
Skip blank lines.
Munyoki Kilyungi
2025-07-17
Skip malformed genotype rows with mismatched data columns.
Munyoki Kilyungi
2025-07-16
feat: Add unittests for llm rate limiting functionality.
Alexander_Kabui
2025-07-16
refactor: pass request headers as dict.
Alexander_Kabui
2025-07-16
feat: Add unittest for cleaning up gnqna queries.
Alexander_Kabui
2025-07-16
refactor: pass required fields directly instead of request object for rate l...
Alexander_Kabui
2025-07-16
feat: Minor fix.
Alexander_Kabui
2025-07-16
feat: Implement gnqna rate limiter.
Alexander_Kabui
2025-07-16
Add kludge comment for "HSNIH-Palmer_true.geno" which has floats.
Munyoki Kilyungi
2025-07-16
Set a larger map size for the larger genotype files.
Munyoki Kilyungi
2025-07-16
Add functionality for importing one entire genotype directory.
Munyoki Kilyungi
2025-07-16
More efficiently and correctly count nrows is genotype.
Munyoki Kilyungi
2025-07-16
Delete un-used import.
Munyoki Kilyungi
2025-07-16
Add module doc-string.
Munyoki Kilyungi
2025-07-16
Improve genotype file parsing.
Munyoki Kilyungi
2025-07-16
Simplify genotype db script.
Munyoki Kilyungi
2025-07-16
Add genotype matrix script.
Munyoki Kilyungi
2025-07-09
Re-apply "Chores/gnqa no login"
BonfaceKilz
2025-07-09
Revert "Chores/gnqa no login" (#229)
BonfaceKilz
2025-07-07
Ignore pylint rule.
Munyoki Kilyungi
2025-07-07
Delete unused import.
Munyoki Kilyungi
2025-07-07
Remove default LMDB_DATA_PATH.
Munyoki Kilyungi
2025-07-07
Add null check for cursor.fetchone() in apply_change function.
Munyoki Kilyungi
2025-07-07
Only queue an edit during edits.
Munyoki Kilyungi
2025-07-07
Fix minor bug in how reviews and approvals are added to LMDB.
Munyoki Kilyungi
2025-07-07
Update endpoint for listing diffs to include the change_type.
Munyoki Kilyungi
2025-07-07
Rename dict key.
Munyoki Kilyungi
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