diff options
Diffstat (limited to 'tests')
| -rw-r--r-- | tests/unit/computations/test_biweight.py | 16 | ||||
| -rw-r--r-- | tests/unit/computations/test_correlation.py | 2 |
2 files changed, 9 insertions, 9 deletions
diff --git a/tests/unit/computations/test_biweight.py b/tests/unit/computations/test_biweight.py index 3045f78..ad404f1 100644 --- a/tests/unit/computations/test_biweight.py +++ b/tests/unit/computations/test_biweight.py @@ -2,20 +2,20 @@ from unittest import TestCase from unittest import mock -from gn3.computations.biweight import call_biweight_script +from gn3.computations.biweight import calculate_biweight_corr class TestBiweight(TestCase): """test class for biweight""" @mock.patch("gn3.computations.biweight.subprocess.check_output") - def test_call_biweight_script(self, mock_check_output): - """test for call_biweight_script func""" + def test_calculate_biweight_corr(self, mock_check_output): + """test for calculate_biweight_corr func""" mock_check_output.return_value = "0.1 0.5" - results = call_biweight_script(command="Rscript", - path_to_script="./r_script.R", - trait_vals=[ - 1.2, 1.1, 1.9], - target_vals=[1.9, 0.4, 1.1]) + results = calculate_biweight_corr(command="Rscript", + path_to_script="./r_script.R", + trait_vals=[ + 1.2, 1.1, 1.9], + target_vals=[1.9, 0.4, 1.1]) self.assertEqual(results, (0.1, 0.5)) diff --git a/tests/unit/computations/test_correlation.py b/tests/unit/computations/test_correlation.py index 606f96d..b1bc6ef 100644 --- a/tests/unit/computations/test_correlation.py +++ b/tests/unit/computations/test_correlation.py @@ -98,7 +98,7 @@ class TestCorrelation(TestCase): self.assertEqual(results, expected_results) - @mock.patch("gn3.computations.correlations.call_biweight_script") + @mock.patch("gn3.computations.correlations.calculate_biweight_corr") def test_bicor(self, mock_biweight): """Test for doing biweight mid correlation """ mock_biweight.return_value = (1.0, 0.0) |