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Diffstat (limited to 'gn3/computations/gemma.py')
| -rw-r--r-- | gn3/computations/gemma.py | 13 |
1 files changed, 7 insertions, 6 deletions
diff --git a/gn3/computations/gemma.py b/gn3/computations/gemma.py index 6c53ecc..f07628f 100644 --- a/gn3/computations/gemma.py +++ b/gn3/computations/gemma.py @@ -41,12 +41,13 @@ def generate_pheno_txt_file(trait_filename: str, # pylint: disable=R0913 -def generate_gemma_cmd(gemma_cmd: str, - output_dir: str, - token: str, - gemma_kwargs: Dict, - gemma_wrapper_kwargs: Optional[Dict] = None, - chromosomes: Optional[str] = None) -> Dict: +def generate_gemma_cmd(# pylint: disable=[too-many-positional-arguments] + gemma_cmd: str, + output_dir: str, + token: str, + gemma_kwargs: Dict, + gemma_wrapper_kwargs: Optional[Dict] = None, + chromosomes: Optional[str] = None) -> Dict: """Compute k values""" _hash = get_hash_of_files( [v for k, v in gemma_kwargs.items() if k in ["g", "p", "a", "c"]]) |