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authorFrederick Muriuki Muriithi2025-02-28 12:44:55 -0600
committerFrederick Muriuki Muriithi2025-02-28 12:44:55 -0600
commitef1436bca390ee916b7119036ab2d3de8d1344fb (patch)
tree8ed0197669d51d2f825080bfbda10e35fa2403aa /gn3/computations/gemma.py
parent4edc4450e6fe578212600ad9733f0fa6eb3ffc9f (diff)
downloadgenenetwork3-ef1436bca390ee916b7119036ab2d3de8d1344fb.tar.gz
Fix linting errors.
Diffstat (limited to 'gn3/computations/gemma.py')
-rw-r--r--gn3/computations/gemma.py13
1 files changed, 7 insertions, 6 deletions
diff --git a/gn3/computations/gemma.py b/gn3/computations/gemma.py
index 6c53ecc..f07628f 100644
--- a/gn3/computations/gemma.py
+++ b/gn3/computations/gemma.py
@@ -41,12 +41,13 @@ def generate_pheno_txt_file(trait_filename: str,
 
 
 # pylint: disable=R0913
-def generate_gemma_cmd(gemma_cmd: str,
-                       output_dir: str,
-                       token: str,
-                       gemma_kwargs: Dict,
-                       gemma_wrapper_kwargs: Optional[Dict] = None,
-                       chromosomes: Optional[str] = None) -> Dict:
+def generate_gemma_cmd(# pylint: disable=[too-many-positional-arguments]
+        gemma_cmd: str,
+        output_dir: str,
+        token: str,
+        gemma_kwargs: Dict,
+        gemma_wrapper_kwargs: Optional[Dict] = None,
+        chromosomes: Optional[str] = None) -> Dict:
     """Compute k values"""
     _hash = get_hash_of_files(
         [v for k, v in gemma_kwargs.items() if k in ["g", "p", "a", "c"]])