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| author | Frederick Muriuki Muriithi | 2024-09-28 16:55:54 -0500 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2024-09-28 16:55:54 -0500 |
| commit | c2c89bdc69913b86495b0fd568b554c357ec7ccf (patch) | |
| tree | fa742fe24ff7cf69f24aba5ed527727201fc0330 /tests | |
| parent | b57d43ff863fd1e9a80d1579bc66ce8a7174480e (diff) | |
| download | genenetwork3-c2c89bdc69913b86495b0fd568b554c357ec7ccf.tar.gz | |
Lint: fix some linting errors.
Diffstat (limited to 'tests')
| -rw-r--r-- | tests/fixtures/rdf.py | 6 | ||||
| -rw-r--r-- | tests/unit/db/rdf/test_wiki.py | 18 |
2 files changed, 12 insertions, 12 deletions
diff --git a/tests/fixtures/rdf.py b/tests/fixtures/rdf.py index b942282..9bf297b 100644 --- a/tests/fixtures/rdf.py +++ b/tests/fixtures/rdf.py @@ -1,9 +1,9 @@ """Test fixtures to set up a test named graph for loading RDF data.""" import os -from requests.auth import HTTPDigestAuth -from flask import config -import requests + import pytest +import requests +from requests.auth import HTTPDigestAuth def get_sparql_auth_conf(config_obj) -> dict: diff --git a/tests/unit/db/rdf/test_wiki.py b/tests/unit/db/rdf/test_wiki.py index c737f29..7627dbf 100644 --- a/tests/unit/db/rdf/test_wiki.py +++ b/tests/unit/db/rdf/test_wiki.py @@ -187,10 +187,10 @@ def test_sanitize_result(result, expected): @pytest.mark.rdf def test_get_wiki_entries_by_symbol(fxtr_app_config, rdf_setup): # pylint: disable=W0613,W0621 """Test that wiki entries are fetched correctly by symbol""" - SPARQL_CONF = get_sparql_auth_conf(fxtr_app_config) + sparql_conf = get_sparql_auth_conf(fxtr_app_config) result = get_wiki_entries_by_symbol( symbol="ckb", - sparql_uri=SPARQL_CONF["sparql_endpoint"], + sparql_uri=sparql_conf["sparql_endpoint"], graph=GRAPH, ) expected = { @@ -262,10 +262,10 @@ and C1QL3 (CTRP13).", @pytest.mark.rdf def test_get_comment_history(fxtr_app_config, rdf_setup): # pylint: disable=W0613,W0621 """Test fetching a comment's history from RDF""" - SPARQL_CONF = get_sparql_auth_conf(fxtr_app_config) + sparql_conf = get_sparql_auth_conf(fxtr_app_config) result = get_comment_history( comment_id=1158, - sparql_uri=SPARQL_CONF["sparql_endpoint"], + sparql_uri=sparql_conf["sparql_endpoint"], graph=GRAPH, ) expected = { @@ -355,7 +355,7 @@ Possible 3' UTR variants.", @pytest.mark.rdf def test_update_wiki_comment(fxtr_app_config, rdf_setup): # pylint: disable=W0613,W0621 """Test that a comment is updated correctly""" - SPARQL_CONF = get_sparql_auth_conf(fxtr_app_config) + sparql_conf = get_sparql_auth_conf(fxtr_app_config) update_wiki_comment( insert_dict={ "Id": 230, @@ -371,14 +371,14 @@ def test_update_wiki_comment(fxtr_app_config, rdf_setup): # pylint: disable=W06 "species": "mouse", "categories": [], }, - sparql_user=SPARQL_CONF["sparql_user"], - sparql_password=SPARQL_CONF["sparql_password"], - sparql_auth_uri=SPARQL_CONF["sparql_auth_uri"], + sparql_user=sparql_conf["sparql_user"], + sparql_password=sparql_conf["sparql_password"], + sparql_auth_uri=sparql_conf["sparql_auth_uri"], graph=GRAPH, ) updated_history = get_comment_history( comment_id=230, - sparql_uri=SPARQL_CONF["sparql_endpoint"], + sparql_uri=sparql_conf["sparql_endpoint"], graph=GRAPH, )["data"] assert len(updated_history) == 4 |