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| author | Alexander Kabui | 2021-08-11 09:18:19 +0300 |
|---|---|---|
| committer | GitHub | 2021-08-11 09:18:19 +0300 |
| commit | 95eb105421d7fbe0b0ebf1de2f89a558eecbf0da (patch) | |
| tree | aadc8d5b9b066214dc102c762de5a6a0aa13d0b1 /gn3/api | |
| parent | e0476d51603432f60b6412b65486166deabe9e08 (diff) | |
| download | genenetwork3-95eb105421d7fbe0b0ebf1de2f89a558eecbf0da.tar.gz | |
use normal function for correlation (#34)
* use normal function for correlation + rename functions
* update test for sample correlation
* use normal function for tissue correlation + rename functions
Diffstat (limited to 'gn3/api')
| -rw-r--r-- | gn3/api/correlation.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/gn3/api/correlation.py b/gn3/api/correlation.py index e7e89cf..a3e366e 100644 --- a/gn3/api/correlation.py +++ b/gn3/api/correlation.py @@ -5,7 +5,7 @@ from flask import request from gn3.computations.correlations import compute_all_sample_correlation from gn3.computations.correlations import compute_all_lit_correlation -from gn3.computations.correlations import compute_all_tissue_correlation +from gn3.computations.correlations import compute_tissue_correlation from gn3.computations.correlations import map_shared_keys_to_values from gn3.db_utils import database_connector @@ -78,7 +78,7 @@ def compute_tissue_corr(corr_method="pearson"): primary_tissue_dict = tissue_input_data["primary_tissue"] target_tissues_dict = tissue_input_data["target_tissues_dict"] - results = compute_all_tissue_correlation(primary_tissue_dict=primary_tissue_dict, + results = compute_tissue_correlation(primary_tissue_dict=primary_tissue_dict, target_tissues_data=target_tissues_dict, corr_method=corr_method) |