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author | Arun Isaac | 2024-08-01 18:43:51 +0100 |
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committer | Arun Isaac | 2024-08-01 18:45:45 +0100 |
commit | 4b2e9f3fb3383421d7a55df5399aab71e0cc3b4f (patch) | |
tree | 9efad10bbe8fda40bd909489d52c81e143ffe351 /gn3/api | |
parent | a37622b466f9f045db06a6f07e88fcf81b176f91 (diff) | |
download | genenetwork3-4b2e9f3fb3383421d7a55df5399aab71e0cc3b4f.tar.gz |
Stem group field regardless of case.
* gn3/api/search.py (parse_boolean_prefixed_field): New function.
(parse_query): Use parse_boolean_prefixed_field for the group field.
Diffstat (limited to 'gn3/api')
-rw-r--r-- | gn3/api/search.py | 11 |
1 files changed, 10 insertions, 1 deletions
diff --git a/gn3/api/search.py b/gn3/api/search.py index 05a989c..e4e2d9f 100644 --- a/gn3/api/search.py +++ b/gn3/api/search.py @@ -194,6 +194,14 @@ def parse_location_field(species_query: xapian.Query, .maybe(xapian.Query.MatchNothing, make_query)) +def parse_boolean_prefixed_field(prefix: str, query: bytes) -> xapian.Query: + """Parse boolean prefixed field and return a xapian query.""" + # For some reason, xapian does not stem boolean prefixed fields + # when the query starts with a capital letter. We need it to stem + # always. Hence this function. + return xapian.Query(prefix + query.decode("utf-8").lower()) + + # pylint: disable=too-many-locals def parse_query(synteny_files_directory: Path, query: str): """Parse search query using GeneNetwork specific field processors.""" @@ -204,7 +212,8 @@ def parse_query(synteny_files_directory: Path, query: str): chromosome_prefix = "XC" queryparser.add_boolean_prefix("author", "A") queryparser.add_boolean_prefix("species", species_prefix) - queryparser.add_boolean_prefix("group", "XG") + queryparser.add_boolean_prefix("group", + FieldProcessor(partial(parse_boolean_prefixed_field, "XG"))) queryparser.add_boolean_prefix("tissue", "XI") queryparser.add_boolean_prefix("dataset", "XDS") queryparser.add_boolean_prefix("symbol", "XY") |