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| author | Munyoki Kilyungi | 2024-02-25 17:50:50 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2024-02-25 17:57:17 +0300 |
| commit | 5c765c7dca6c20c0dc2cd2e300ea9214ba10714f (patch) | |
| tree | 29bf5c5934cd8ed2c86e0069a06ee8e4037d03c2 | |
| parent | 3e1261eab74bada1fd1c037df633a50e9a94eef9 (diff) | |
| download | genenetwork3-5c765c7dca6c20c0dc2cd2e300ea9214ba10714f.tar.gz | |
Fix line-too-long error.
* gn3/heatmaps.py (build_heatmap): Break down call to run_reaper
command into many lines to fix pylint error.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
| -rw-r--r-- | gn3/heatmaps.py | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/gn3/heatmaps.py b/gn3/heatmaps.py index 1a528ba..b6822d4 100644 --- a/gn3/heatmaps.py +++ b/gn3/heatmaps.py @@ -142,7 +142,11 @@ def build_heatmap( traits_filename) main_output, _permutations_output = run_reaper( - app.config['REAPER_COMMAND'], genotype_filename, traits_filename, separate_nperm_output=True) + app.config['REAPER_COMMAND'], + genotype_filename, + traits_filename, + separate_nperm_output=True + ) qtlresults = parse_reaper_main_results(main_output) organised = organise_reaper_main_results(qtlresults) |