From 5c765c7dca6c20c0dc2cd2e300ea9214ba10714f Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Sun, 25 Feb 2024 17:50:50 +0300 Subject: Fix line-too-long error. * gn3/heatmaps.py (build_heatmap): Break down call to run_reaper command into many lines to fix pylint error. Signed-off-by: Munyoki Kilyungi --- gn3/heatmaps.py | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/gn3/heatmaps.py b/gn3/heatmaps.py index 1a528ba..b6822d4 100644 --- a/gn3/heatmaps.py +++ b/gn3/heatmaps.py @@ -142,7 +142,11 @@ def build_heatmap( traits_filename) main_output, _permutations_output = run_reaper( - app.config['REAPER_COMMAND'], genotype_filename, traits_filename, separate_nperm_output=True) + app.config['REAPER_COMMAND'], + genotype_filename, + traits_filename, + separate_nperm_output=True + ) qtlresults = parse_reaper_main_results(main_output) organised = organise_reaper_main_results(qtlresults) -- cgit v1.2.3