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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
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partial-correlations
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phewas
production
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refactor-data_set_py-20220920
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scripts
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Author
2024-03-22
Update ProbeSetSE table schema.
Frederick Muriuki Muriithi
2024-01-02
Move default settings into gn2 module.
Arun Isaac
2023-10-24
Add script for converting the HXBBXH genotype file provided by Hao.
zsloan
2023-10-24
Add script for creating list of ProbeSet datasets with NAs for Max QTL
zsloan
2023-06-22
Update calls to `database_connection` function
Frederick Muriuki Muriithi
2023-03-08
Add DataAnalyzer.py script to maintenance scripts
zsloan
2023-02-03
Add perf scripts that compare fetching a trait using GN API vs LMDB
Munyoki Kilyungi
2023-01-26
Dump metadata in addition to sample data.
Munyoki Kilyungi
2023-01-20
Make dump script faster by using concurrency module
Munyoki Kilyungi
2023-01-20
Dump all sample data into a given directory
Munyoki Kilyungi
2023-01-20
Return a trait's display name if the name is non-existent
Munyoki Kilyungi
2023-01-20
Update demo to dump entire dataset for BXDPublish
Munyoki Kilyungi
2023-01-20
Remove hard-coded values
Munyoki Kilyungi
2023-01-20
Fix typo
Munyoki Kilyungi
2023-01-20
Add example that demos dumping data from an entire dataset
Munyoki Kilyungi
2023-01-20
Add a function that fetches all the traits given the right params
Munyoki Kilyungi
2023-01-20
Create script to dumple sample data given the dataset and trait id
Munyoki Kilyungi
2022-06-03
Give speciesid single quotes like the other config_dic keys, just for consist...
zsloan
2022-06-03
Allow GenoFreezeId to be passed in configurations to load_genotypes.py
zsloan
2022-03-11
Add updated version of script for adding new expression sample data
zsloan
2022-03-10
Use context manager with database connection
Frederick Muriuki Muriithi
2021-12-17
Some updates to the DOL genotypes conversion script
zsloan
2021-11-05
Add created_timestamp when creating a new group
BonfaceKilz
2021-11-05
Add created_timestamp when creating a new group
BonfaceKilz
2021-11-05
Use members uuid
BonfaceKilz
2021-11-05
Add script for manually adding "editors" to each resource
BonfaceKilz
2021-10-25
scripts: resource: Add value for "admin" when updating resources
BonfaceKilz
2021-10-25
scripts: resource.py: Add shebang
BonfaceKilz
2021-10-25
scripts: group.py: Add extra optional arg to specify uid
BonfaceKilz
2021-10-25
scripts: group.py: Add shebang
BonfaceKilz
2021-10-22
Include the admin privilege for the 'editors' group, since it wasn't being se...
zsloan
2021-10-08
Fixed the sort to account for both chr and pos in a kind of hack-y way + adde...
zsloan
2021-10-08
Adding convert_dol_genotypes.py to scripts; everything is hard-coded in it si...
zsloan
2021-10-06
scripts: resource: Add option for specifying a groups uuid
BonfaceKilz
2021-10-06
scripts: group: Replace args.group_name with data["field"]
BonfaceKilz
2021-10-06
scripts: group: Update docstrings for "create_group_data"
BonfaceKilz
2021-10-06
scripts: group: Break up long line
BonfaceKilz
2021-10-06
scripts: group: Fix indentation
BonfaceKilz
2021-10-06
scripts: group: Remove empty `""` value for data.get
BonfaceKilz
2021-10-06
scripts: group: Remove unused import
BonfaceKilz
2021-10-06
scripts: group: Use a unique key to identify a group
BonfaceKilz
2021-10-04
Moved REDIS_CONN back into if __name__ == '__main__' since it doesn't need to...
zsloan
2021-10-04
Changed the group.py script to replace user e-mails with IDs and to include i...
zsloan
2021-10-04
scripts: group.py: Modify exit message when displaying updated data
BonfaceKilz
2021-10-04
scripts: group.py: Remove "glom" dependency
BonfaceKilz
2021-10-04
Decode redis response by default
BonfaceKilz
2021-10-04
Modify resource editing script to enable data backups & restoration
BonfaceKilz
2021-10-04
Add script that adds "editors" group to all resources in Redis
BonfaceKilz
2021-10-04
Add script for creating/ updating groups during authorisation
BonfaceKilz
2021-08-16
Add "Description" column to CaseAttribute
BonfaceKilz
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