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authorMunyoki Kilyungi2022-09-01 16:29:19 +0300
committerBonfaceKilz2022-09-08 14:26:19 +0300
commit026ceff5ea71f07f32db88e01fadfe38dbc39c75 (patch)
treed9aeea01d7b8eef8300599f5460af91c847127a9 /wqflask/utility/authentication_tools.py
parentf20213ac7f9f37b0fed97e670db5de904efeb920 (diff)
downloadgenenetwork2-026ceff5ea71f07f32db88e01fadfe38dbc39c75.tar.gz
Replace g.db with database_connection() context manager
* wqflask/wqflask/update_search_results.py: Replace "Flask" and "g" import with "database_connection". (GSearch.__init__): Reformat SQL. Rename "re" to "results" since "re" is part of the stdlib. * wqflask/wqflask/marker_regression/rqtl_mapping.py: Replace flask.g with database_connection. (write_covarstruct_file): Replace g.db with database_connection(). * wqflask/wqflask/search_results.py: Replace "Flask" and "g" imports with "database_connection" import. (trait_info_str): Replace g.db with database_connection. * wqflask/wqflask/docs.py (Docs): Use dababase_connection() context manager. (update_text): Ditto. * wqflask/wqflask/marker_regression/display_mapping_results.py: Replace "Flask" and "g" import with "database_connection". (DisplayMappingResults.__init__): Use database_connection. (DisplayMappingResults.drawSNPTrackNew): Ditto.
Diffstat (limited to 'wqflask/utility/authentication_tools.py')
-rw-r--r--wqflask/utility/authentication_tools.py1
1 files changed, 1 insertions, 0 deletions
diff --git a/wqflask/utility/authentication_tools.py b/wqflask/utility/authentication_tools.py
index afea69e1..96cc0b00 100644
--- a/wqflask/utility/authentication_tools.py
+++ b/wqflask/utility/authentication_tools.py
@@ -2,6 +2,7 @@ import json
import requests
from flask import g
+from wqflask.database import database_connection
from base import webqtlConfig
from utility.redis_tools import (get_redis_conn,