aboutsummaryrefslogtreecommitdiff
path: root/gn2
diff options
context:
space:
mode:
authorAlexander_Kabui2024-09-23 11:51:53 +0300
committerAlexander_Kabui2024-09-23 11:51:53 +0300
commit89eedfc779bb169354ea02eaa322a56669ed78de (patch)
tree2a4e52fe4d06a7e15cb09db11355744482044b61 /gn2
parent7613298d6c427f4f3cfd3bd843e6d41099cba125 (diff)
downloadgenenetwork2-89eedfc779bb169354ea02eaa322a56669ed78de.tar.gz
Refactor: run djlint for index page file.
Diffstat (limited to 'gn2')
-rwxr-xr-xgn2/wqflask/templates/index_page.html569
1 files changed, 349 insertions, 220 deletions
diff --git a/gn2/wqflask/templates/index_page.html b/gn2/wqflask/templates/index_page.html
index 216e1c38..135c2921 100755
--- a/gn2/wqflask/templates/index_page.html
+++ b/gn2/wqflask/templates/index_page.html
@@ -1,23 +1,23 @@
{% extends "base.html" %}
{% block title %}GeneNetwork{% endblock %}
{% block css %}
-<!-- UIkit CSS -->
-<link rel="stylesheet" type="text/css" href="{{ url_for('css', filename='uikit/css/uikit.min.css') }}"/>
-
-<link rel="stylesheet" href="/static/new/css/index_page.css" />
-<link rel="stylesheet" href="/static/new/css/autocomplete.css"/>
-
-<!-- UIkit JS -->
-<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='uikit/js/uikit.min.js') }}"></script>
-
-<script language="javascript" type="text/javascript" src="{{ url_for('js', filename='uikit/js/uikit-icons.min.js') }}"></script>
-
-<!--locally built emfed package see source file:https://github.com/sampsyo/emfed -->
-<script type="module" src="static/new/javascript/emfed.bundle.js"></script>
-<link rel="stylesheet" type="text/css"
- href="static/new/css/toots.css">
-<style TYPE="text/css">
-
+ <!-- UIkit CSS -->
+ <link rel="stylesheet"
+ type="text/css"
+ href="{{ url_for('css', filename='uikit/css/uikit.min.css') }}" />
+ <link rel="stylesheet" href="/static/new/css/index_page.css" />
+ <link rel="stylesheet" href="/static/new/css/autocomplete.css" />
+ <!-- UIkit JS -->
+ <script language="javascript"
+ type="text/javascript"
+ src="{{ url_for('js', filename='uikit/js/uikit.min.js') }}"></script>
+ <script language="javascript"
+ type="text/javascript"
+ src="{{ url_for('js', filename='uikit/js/uikit-icons.min.js') }}"></script>
+ <!--locally built emfed package see source file:https://github.com/sampsyo/emfed -->
+ <script type="module" src="static/new/javascript/emfed.bundle.js"></script>
+ <link rel="stylesheet" type="text/css" href="static/new/css/toots.css">
+ <style TYPE="text/css">
p.interact { display: none; }
@@ -88,188 +88,278 @@
}
-</style>
+ </style>
+{% endblock %}
+{% block search %}
+ <div class="container-fluid"
+ style="width: 100%;
+ min-width: 650px;
+ position: relative;
+ background-color: #d5d5d5;
+ height: 100px">
+ <form method="get" action="/gsearch" id="globalsearchform">
+ <div class="form-group">
+ <div class="controls">
+ <select name="type">
+ <option value="gene">Genes / Molecules</option>
+ <option value="phenotype" {% if type=="phenotype" %}selected{% endif %}>Phenotypes</option>
+ </select>
+ <div class="col-8 autocomplete"
+ style="margin-left: 30px;
+ margin-right: 10px">
+ <input autocomplete="off"
+ class="global_search_input"
+ id="term"
+ style="width:45vw"
+ type="text"
+ required
+ placeholder="Enter you search term here (ex: cytochrome AND P450)"
+ name="terms">
+ <button type="submit"
+ class="btn-stc"
+ style="position: absolute;
+ background-color: #336699">
+ <i class="fa fa-search" title="Search " style="color:white;"></i>
+ </button>
+ </div>
+ <!-- todo fix text overlap for this;;responsiveness-->
+ <span style="padding: 5px;margin-left: 65px;" id="gnqna_home">
+ <a href="/gnqna">GNQA Search</a>
+ </span>
+ <span style="padding: 5px;margin-left: 65px;">
+ <a style="text-decoration: none" target="_blank" href="/search-syntax">
+ <i style="text-align: center;
+ color:#336699"
+ class="fa fa-question-circle fa-2x"
+ title="see more search hints"
+ aria-hidden="true"></i>
+ </a>
+ </span>
+ </div>
+ </div>
+ </form>
+ </div>
{% endblock %}
-
-
- {% block search %}
- <div class="container-fluid" style="width: 100%; min-width: 650px; position: relative;background-color: #d5d5d5; height: 100px;">
- <form method="get" action="/gsearch" id="globalsearchform">
- <div class="form-group">
- <div class="controls">
- <select name="type">
- <option value="gene">Genes / Molecules</option>
- <option value="phenotype" {% if type=="phenotype" %}selected{% endif %}>Phenotypes</option>
- </select>
- <div class="col-8 autocomplete" style="margin-left: 30px;margin-right: 10px;">
- <input autocomplete="off" class="global_search_input" id="term" style="width:45vw" type="text" required placeholder="Enter you search term here (ex: cytochrome AND P450)" name="terms">
-
- <button type="submit" class="btn-stc" style="position: absolute; background-color: #336699"><i class="fa fa-search" title="Search " style="color:white;"></i></button>
- </div>
- <!-- todo fix text overlap for this;;responsiveness-->
-
- <span style="padding: 5px;margin-left: 65px;" id="gnqna_home">
- <a href="/gnqna">GNQA Search</a>
- </span>
-
- <span style="padding: 5px;margin-left: 65px;" >
- <a style="text-decoration: none" target="_blank" href="/search-syntax">
- <i style="text-align: center;color:#336699;;" class="fa fa-question-circle fa-2x" title="see more search hints" aria-hidden="true"></i>
- </a>
- </span>
- </div>
- </div>
- </form>
- </div>
- {% endblock %}
-
-
{% block content %}
-<!-- Start of body -->
+ <!-- Start of body -->
<div class="container-fluid" style="min-width: 1210px;">
-
- {{ flash_me() }}
-
- {%if anon_collections | length > 0%}
- <div class="panel panel-warning">
- <div class="panel-heading">
- <h3 class="panel-title">Import Anonymous Collections</h3>
- </div>
- <div class="panel-body">
- <p>
- There {%if anon_collections | length > 1%}are{%else%}is{%endif%}
- {{anon_collections | length}} anonymous
- collection{%if anon_collections | length > 1%}s{%endif%}
- associated with your current session. What do you wish to do?
- </p>
- <p class="text-danger" style="font-weight: bold;">
- <small>
- If you choose to ignore this, the anonymous collections will be
- eventually deleted and lost.
- </small>
- </p>
- <form action="{{url_for('handle_anonymous_collections')}}"
- method="POST">
- <div class="form-group">
- <input type="radio" id="rdo-import" value="import"
- name="anon_choice" />
- <label for="rdo-import">Import</label>
- <input type="radio" id="rdo-delete" value="delete"
- name="anon_choice" />
- <label for="rdo-delete">Delete</label>
- </div>
-
- <input type="submit" class="btn btn-warning" value="Submit" />
- </form>
- </div>
- </div>
- {%endif%}
-
+ {{ flash_me() }}
+ {% if anon_collections | length > 0 %}
+ <div class="panel panel-warning">
+ <div class="panel-heading">
+ <h3 class="panel-title">Import Anonymous Collections</h3>
+ </div>
+ <div class="panel-body">
+ <p>
+ There
+ {% if anon_collections | length > 1 %}
+ are
+ {% else %}
+ is
+ {% endif %}
+ {{ anon_collections | length }} anonymous
+ collection
+ {% if anon_collections | length > 1 %}s{% endif %}
+ associated with your current session. What do you wish to do?
+ </p>
+ <p class="text-danger" style="font-weight: bold;">
+ <small>
+ If you choose to ignore this, the anonymous collections will be
+ eventually deleted and lost.
+ </small>
+ </p>
+ <form action="{{ url_for("handle_anonymous_collections") }}" method="post">
+ <div class="form-group">
+ <input type="radio" id="rdo-import" value="import" name="anon_choice" />
+ <label for="rdo-import">Import</label>
+ <input type="radio" id="rdo-delete" value="delete" name="anon_choice" />
+ <label for="rdo-delete">Delete</label>
+ </div>
+ <input type="submit" class="btn btn-warning" value="Submit" />
+ </form>
+ </div>
+ </div>
+ {% endif %}
<div class="row" style="width: 100%;">
-
- <div class="col-xs-4" style="margin-right:50px; min-width: 530px; max-width: 550px;">
+ <div class="col-xs-4"
+ style="margin-right:50px;
+ min-width: 530px;
+ max-width: 550px">
<section id="search">
<div class="page-header">
<h2>Select and Search</h2>
</div>
- <form method="get" action="/search" target="_blank" id="searchform" name="SEARCHFORM",
- data-gn_server_url="{{gn_server_url}}">
+ <form method="get"
+ action="/search"
+ target="_blank"
+ id="searchform"
+ name="SEARCHFORM"
+ data-gn_server_url="{{ gn_server_url }}">
<fieldset>
- <div style="padding-left: 20px; padding-right: 20px;" class="form-horizontal">
-
+ <div style="padding-left: 20px;
+ padding-right: 20px"
+ class="form-horizontal">
<div class="form-group">
- <label for="species" class="col-xs-1 control-label" style="width: 65px !important;">Species:</label>
- <div class="col-xs-10 controls input-append" style="display: flex; padding-left: 20px;">
+ <label for="species"
+ class="col-xs-1 control-label"
+ style="width: 65px !important">Species:</label>
+ <div class="col-xs-10 controls input-append"
+ style="display: flex;
+ padding-left: 20px">
<div class="col-9">
- <select name="species" id="species" class="form-control" style="width: 340px !important;"><option>Loading...</option></select>
+ <select name="species"
+ id="species"
+ class="form-control"
+ style="width: 340px !important">
+ <option>Loading...</option>
+ </select>
</div>
</div>
</div>
-
<div class="form-group">
- <label for="group" class="col-xs-1 control-label" style="width: 65px !important;">Group:</label>
- <div class="col-xs-10 controls input-append" style="display: flex; padding-left: 20px;">
+ <label for="group"
+ class="col-xs-1 control-label"
+ style="width: 65px !important">Group:</label>
+ <div class="col-xs-10 controls input-append"
+ style="display: flex;
+ padding-left: 20px">
<div class="col-9">
- <select name="group" id="group" class="form-control" style="width: 340px !important;"><option>Loading...</option></select>
- <i class="icon-question-sign"></i>
+ <select name="group"
+ id="group"
+ class="form-control"
+ style="width: 340px !important">
+ <option>Loading...</option>
+ </select>
+ <i class="icon-question-sign"></i>
</div>
<div class="col-3" style="margin-left: 10px;">
- <button type="button" id="group_info" class="btn form-control info-button"><span class="glyphicon glyphicon-flag"></span> Info</button>
+ <button type="button" id="group_info" class="btn form-control info-button">
+ <span class="glyphicon glyphicon-flag"></span> Info
+ </button>
</div>
</div>
</div>
-
<div class="form-group">
- <label for="tissue" class="col-xs-1 control-label" style="width: 65px !important;">Type:</label>
- <div class="col-xs-10 controls input-append" style="display: flex; padding-left: 20px;">
+ <label for="tissue"
+ class="col-xs-1 control-label"
+ style="width: 65px !important">Type:</label>
+ <div class="col-xs-10 controls input-append"
+ style="display: flex;
+ padding-left: 20px">
<div class="col-9">
- <select name="type" id="type" class="form-control" style="width: 340px !important;"><option>Loading...</option></select>
+ <select name="type"
+ id="type"
+ class="form-control"
+ style="width: 340px !important">
+ <option>Loading...</option>
+ </select>
</div>
<div class="col-3" style="margin-left: 10px;">
- <button type="button" id="dataset_info" class="btn form-control info-button"><span class="glyphicon glyphicon-flag"></span> Info</button>
+ <button type="button" id="dataset_info" class="btn form-control info-button">
+ <span class="glyphicon glyphicon-flag"></span> Info
+ </button>
</div>
</div>
</div>
-
<div class="form-group">
- <label for="dataset" class="col-xs-1 control-label" style="width: 65px !important;">Dataset:</label>
+ <label for="dataset"
+ class="col-xs-1 control-label"
+ style="width: 65px !important">Dataset:</label>
<div class="col-xs-10 controls" style="display: flex; padding-left: 20px;">
<div class="col-9">
- <select name="dataset" id="dataset" class="form-control" style="max-width: 550px; width: 450px !important;"><option>Loading...</option></select>
- <i class="icon-question-sign"></i>
+ <select name="dataset"
+ id="dataset"
+ class="form-control"
+ style="max-width: 550px;
+ width: 450px !important">
+ <option>Loading...</option>
+ </select>
+ <i class="icon-question-sign"></i>
</div>
</div>
</div>
<!-- GET ANY SEARCH -->
-
<div class="form-group">
- <label for="or_search" class="col-xs-1 control-label" style="padding-left: 0px; padding-right: 0px; width: 65px !important;">Get Any:</label>
+ <label for="or_search"
+ class="col-xs-1 control-label"
+ style="padding-left: 0px;
+ padding-right: 0px;
+ width: 65px !important">Get Any:</label>
<div class="col-xs-10 controls" style="padding-left: 20px;">
<div class="col-8 autocomplete">
- <textarea id="myInput" onkeyup="pressed(event)" name="search_terms_or" rows="1" class="form-control search-query" style="resize: vertical; max-width: 550px; width: 450px !important;" id="or_search"></textarea>
+ <textarea id="myInput"
+ onkeyup="pressed(event)"
+ name="search_terms_or"
+ rows="1"
+ class="form-control search-query"
+ style="resize: vertical;
+ max-width: 550px;
+ width: 450px !important"
+ id="or_search"></textarea>
</div>
</div>
</div>
-
<!-- GET ANY HELP -->
<div class="form-group">
- <label for="btsearch" class="col-xs-1 control-label" style="width: 65px !important;"></label>
+ <label for="btsearch"
+ class="col-xs-1 control-label"
+ style="width: 65px !important"></label>
<div class="col-xs-10 controls" style="padding-left: 20px;">
<div class="col-12 controls">
- Enter terms, genes, ID numbers in the <b>Search</b> field.<br>
- Use <b>*</b> or <b>?</b> wildcards (Cyp*a?, synap*).<br>
+ Enter terms, genes, ID numbers in the <b>Search</b> field.
+ <br>
+ Use <b>*</b> or <b>?</b> wildcards (Cyp*a?, synap*).
+ <br>
Use <b>quotes</b> for terms such as <i>"tyrosine kinase"</i>.
-
-
- <div><strong><a style="text-decoration: none;" href="https://issues.genenetwork.org/topics/xapian/xapian-search-queries" target=”_blank” >see more hints</a></strong></div>
+ <div>
+ <strong>
+ <a style="text-decoration: none"
+ href="https://issues.genenetwork.org/topics/xapian/xapian-search-queries"
+ target="_blank">see more hints</a>
+ </strong>
+ </div>
</div>
</div>
</div>
-
<div class="form-group">
- <label for="and_search" class="col-xs-1 control-label" style="padding-left: 0px; padding-right: 0px; width: 65px !important;">Combined:</label>
+ <label for="and_search"
+ class="col-xs-1 control-label"
+ style="padding-left: 0px;
+ padding-right: 0px;
+ width: 65px !important">Combined:</label>
<div class="col-xs-10 controls" style="padding-left: 20px;">
<div class="col-8 autocomplete">
- <textarea id="myInput" onkeyup="pressed(event)" name="search_terms_and" rows="1" class="form-control search-query" style="resize: vertical; max-width: 550px; width: 450px !important;" id="and_search"></textarea>
+ <textarea id="myInput"
+ onkeyup="pressed(event)"
+ name="search_terms_and"
+ rows="1"
+ class="form-control search-query"
+ style="resize: vertical;
+ max-width: 550px;
+ width: 450px !important"
+ id="and_search"></textarea>
</div>
</div>
</div>
-
<div class="form-group">
- <label for="btsearch" class="col-xs-1 control-label" style="width: 65px !important;"></label>
+ <label for="btsearch"
+ class="col-xs-1 control-label"
+ style="width: 65px !important"></label>
<div class="col-xs-10 controls" style="display: flex; padding-left: 20px;">
<div class="col-2 controls">
- <button id="btsearch" class="btn btn-primary form-control"><span class="glyphicon glyphicon-search"></span> Search</button>
+ <button id="btsearch" class="btn btn-primary form-control">
+ <span class="glyphicon glyphicon-search"></span> Search
+ </button>
</div>
<div class="col-2 align-self-end controls" style="padding-left: 20px;">
- <button type="button" id="make_default" class="btn form-control info-button"><span class="glyphicon glyphicon-pushpin"></span> Lock Menu</button>
+ <button type="button" id="make_default" class="btn form-control info-button">
+ <span class="glyphicon glyphicon-pushpin"></span> Lock Menu
+ </button>
</div>
</div>
</div>
-
<!-- SEARCH, MAKE DEFAULT -->
- <div class="form-group">
- </div>
+ <div class="form-group"></div>
<input type="hidden" name="accession_id" value="None" class="form-control">
<input type="hidden" name="FormID" value="searchResult" class="form-control">
</div>
@@ -280,72 +370,86 @@
<div class="page-header">
<h2>Advanced Commands</h2>
</div>
-
- <p>You can also use advanced commands. Copy these simple examples into the Get Any field for single term searches and Combined for searches with multiple terms:</p>
-
- <ul>
- <li><b>POSITION=(chr1 25 30)</b> finds genes, markers, or transcripts on
- chromosome 1 between 25 and 30 Mb.</li>
-
- <li><b>MEAN=(15 16)</b> in the <b>Combined</b> field finds
- highly expressed genes (15 to 16 log2 units)</li>
-
- <li><b>RANGE=(1.5 2.5)</b> in the <b>Any</b> field finds traits with values with a specified fold-range (minimum = 1).
- Useful for finding "housekeeping genes" <b>(1.0 1.2)</b> or highly variable molecular assays <b>(10 100)</b>.</li>
-
- <li><b>LRS=(15 1000)</b> or <b>LOD=(2 8)</b> finds all traits with peak LRS or LOD scores between lower and upper limits.</li>
-
- <li><b>LRS=(9 999 Chr4 122 155)</b> finds all traits on Chr 4 from 122 and 155 Mb with LRS scores between 9 and 999.</li>
-
- <li><b>cisLRS=(15 1000 5)</b> or <b>cisLOD=(2 8 5)</b> finds all cis eQTLs with peak LRS or LOD scores between lower and upper limits,
- with an <b>inclusion</b> zone of 5 Mb around the parent gene.</li>
-
- <li><b>transLRS=(15 1000 5)</b> or <b>transLOD=(2 8 5)</b> finds all trans eQTLs with peak LRS or LOD scores between lower and upper limits,
+ <p>
+ You can also use advanced commands. Copy these simple examples into the Get Any field for single term searches and Combined for searches with multiple terms:
+ </p>
+ <ul>
+ <li>
+ <b>POSITION=(chr1 25 30)</b> finds genes, markers, or transcripts on
+ chromosome 1 between 25 and 30 Mb.
+ </li>
+ <li>
+ <b>MEAN=(15 16)</b> in the <b>Combined</b> field finds
+ highly expressed genes (15 to 16 log2 units)
+ </li>
+ <li>
+ <b>RANGE=(1.5 2.5)</b> in the <b>Any</b> field finds traits with values with a specified fold-range (minimum = 1).
+ Useful for finding "housekeeping genes" <b>(1.0 1.2)</b> or highly variable molecular assays <b>(10 100)</b>.
+ </li>
+ <li>
+ <b>LRS=(15 1000)</b> or <b>LOD=(2 8)</b> finds all traits with peak LRS or LOD scores between lower and upper limits.
+ </li>
+ <li>
+ <b>LRS=(9 999 Chr4 122 155)</b> finds all traits on Chr 4 from 122 and 155 Mb with LRS scores between 9 and 999.
+ </li>
+ <li>
+ <b>cisLRS=(15 1000 5)</b> or <b>cisLOD=(2 8 5)</b> finds all cis eQTLs with peak LRS or LOD scores between lower and upper limits,
+ with an <b>inclusion</b> zone of 5 Mb around the parent gene.
+ </li>
+ <li>
+ <b>transLRS=(15 1000 5)</b> or <b>transLOD=(2 8 5)</b> finds all trans eQTLs with peak LRS or LOD scores between lower and upper limits,
with an <b>exclusion</b> zone of 5 Mb around the parent gene. You can also add a fourth term specifying which chromosome you want the transLRS to be on
- (for example transLRS=(15 1000 5 7) would find all trans eQTLs with peak LRS on chromosome 7 that is also a trans eQTL with exclusionary zone of 5Mb).</li>
-
- <li><b>POSITION=(Chr4 122 130) cisLRS=(9 999 10)</b>
+ (for example transLRS=(15 1000 5 7) would find all trans eQTLs with peak LRS on chromosome 7 that is also a trans eQTL with exclusionary zone of 5Mb).
+ </li>
+ <li>
+ <b>POSITION=(Chr4 122 130) cisLRS=(9 999 10)</b>
finds all traits on Chr 4 from 122 and 155 Mb with cisLRS scores
- between 9 and 999 and an inclusion zone of 10 Mb.</li>
-
- <li><b>RIF=mitochondrial</b> searches RNA databases for <a href="https://en.wikipedia.org/wiki/GeneRIF">
- GeneRIF</a> links.</li>
-
- <li><b>WIKI=nicotine</b> searches <a href="http://gn1.genenetwork.org/webqtl/main.py?FormID=geneWiki">
- GeneWiki</a> for genes that you or other users have annotated
- with the word <i>nicotine</i>.</li>
-
- <li><b>GO:0045202</b> searches for synapse-associated genes listed in the
- <a href="http://amigo.geneontology.org/amigo/medial_search?q=GO%3A0045202">
- Gene Ontology</a>.</li>
-
- <li><b>RIF=diabetes LRS=(9 999 Chr2 100 105) transLRS=(9 999 10)</b>
- finds diabetes-associated transcripts with peak <a href="{{ url_for('gn_docs_blueprint.glossary') }}#E">
- trans eQTLs</a> on Chr 2 between 100 and 105 Mb with LRS
- scores between 9 and 999.</li>
- </ul>
+ between 9 and 999 and an inclusion zone of 10 Mb.
+ </li>
+ <li>
+ <b>RIF=mitochondrial</b> searches RNA databases for <a href="https://en.wikipedia.org/wiki/GeneRIF">GeneRIF</a> links.
+ </li>
+ <li>
+ <b>WIKI=nicotine</b> searches <a href="http://gn1.genenetwork.org/webqtl/main.py?FormID=geneWiki">GeneWiki</a> for genes that you or other users have annotated
+ with the word <i>nicotine</i>.
+ </li>
+ <li>
+ <b>GO:0045202</b> searches for synapse-associated genes listed in the
+ <a href="http://amigo.geneontology.org/amigo/medial_search?q=GO%3A0045202">Gene Ontology</a>.
+ </li>
+ <li>
+ <b>RIF=diabetes LRS=(9 999 Chr2 100 105) transLRS=(9 999 10)</b>
+ finds diabetes-associated transcripts with peak <a href="{{ url_for("gn_docs_blueprint.glossary") }}#E">trans eQTLs</a> on Chr 2 between 100 and 105 Mb with LRS
+ scores between 9 and 999.
+ </li>
+ </ul>
</section>
</div>
-
<div class="col-xs-4" style="width: 600px !important;">
- <section id="tutorials">
+ <section id="tutorials">
<div class="page-header">
<h2>Tutorials</h2>
</div>
<div class="uk-grid-match uk-child-width-1-3@m" uk-grid>
<div>
- <strong><a class="uk-link-text" href="/tutorials">Webinars & Courses</a></strong><br>
- In-person courses, live webinars and webinar recordings<br>
+ <strong><a class="uk-link-text" href="/tutorials">Webinars & Courses</a></strong>
+ <br>
+ In-person courses, live webinars and webinar recordings
+ <br>
<a href="/tutorials" class="uk-icon-link" uk-icon="laptop" ratio="2"></a>
</div>
<div>
- <strong><a class="uk-link-text" href="/tutorials">Tutorials</a></strong><br>
- Tutorials: Training materials in HTML, PDF and video formats<br>
+ <strong><a class="uk-link-text" href="/tutorials">Tutorials</a></strong>
+ <br>
+ Tutorials: Training materials in HTML, PDF and video formats
+ <br>
<a href="/tutorials" class="uk-icon-link" uk-icon="file-text" ratio="2"></a>
</div>
<div>
- <strong><a class="uk-link-text" href="/tutorials">Documentation</a></strong><br>
- Online manuals, handbooks, fact sheets and FAQs<br>
+ <strong><a class="uk-link-text" href="/tutorials">Documentation</a></strong>
+ <br>
+ Online manuals, handbooks, fact sheets and FAQs
+ <br>
<a href="/tutorials" class="uk-icon-link" uk-icon="album" ratio="2"></a>
</div>
</div>
@@ -354,18 +458,19 @@
<div class="page-header">
<h2>News</h2>
</div>
- <div id="mastadon" style="height: 405px; overflow: scroll; overflow-x: hidden;">
- <a class="mastodon-feed" target="_blank"
- href="https://genomic.social/@genenetwork"
- data-toot-limit="5"
- >Genenetwork mastadon</a>
-
+ <div id="mastadon"
+ style="height: 405px;
+ overflow: scroll;
+ overflow-x: hidden">
+ <a class="mastodon-feed"
+ target="_blank"
+ href="https://genomic.social/@genenetwork"
+ data-toot-limit="5">Genenetwork mastadon</a>
</div>
<div align="right">
-
<a href="https://genomic.social/@genenetwork">more news items...</a>
</div>
- </section>
+ </section>
<section id="websites">
<div class="page-header">
<h2>Links</h2>
@@ -373,56 +478,82 @@
<ul>
<li>Github</li>
<ul>
- <li><a href="https://github.com/genenetwork/genenetwork2">GN2 Source Code</a></li>
- <li><a href="https://github.com/genenetwork/genenetwork3">GN3 Source Code</a></li>
- <li><a href="https://github.com/genenetwork/genenetwork">GN1 Source Code</a></li>
- <li><a href="https://github.com/genenetwork/sysmaintenance">System Maintenance Code</a></li>
+ <li>
+ <a href="https://github.com/genenetwork/genenetwork2">GN2 Source Code</a>
+ </li>
+ <li>
+ <a href="https://github.com/genenetwork/genenetwork3">GN3 Source Code</a>
+ </li>
+ <li>
+ <a href="https://github.com/genenetwork/genenetwork">GN1 Source Code</a>
+ </li>
+ <li>
+ <a href="https://github.com/genenetwork/sysmaintenance">System Maintenance Code</a>
+ </li>
</ul>
</ul>
<ul>
<li>GeneNetwork v2</li>
<ul>
- <li><a href="https://genenetwork.org/">Main website</a> at UTHSC</li>
+ <li>
+ <a href="https://genenetwork.org/">Main website</a> at UTHSC
+ </li>
</ul>
</ul>
<ul>
<li>GeneNetwork v1</li>
<ul>
- <li><a href="http://gn1.genenetwork.org/">Main website</a> at UTHSC</li>
+ <li>
+ <a href="http://gn1.genenetwork.org/">Main website</a> at UTHSC
+ </li>
</ul>
</ul>
<ul>
<li>Affiliates</li>
<ul>
- <li><b><a href="http://gn1.genenetwork.org">GeneNetwork 1</a> at UTHSC</b></li>
- <li><a href="https://systems-genetics.org/">Systems Genetics</a> at EPFL</li>
- <li><a href="http://bnw.genenetwork.org/">Bayesian Network Web Server</a> at UTHSC</li>
- <li><a href="https://www.geneweaver.org/">GeneWeaver</a></li>
- <li><a href="https://phenogen.org/">PhenoGen</a> at University of Colorado</li>
- <li><a href="http://www.webgestalt.org/">WebGestalt</a> at Baylor</li>
+ <li>
+ <b><a href="http://gn1.genenetwork.org">GeneNetwork 1</a> at UTHSC</b>
+ </li>
+ <li>
+ <a href="https://systems-genetics.org/">Systems Genetics</a> at EPFL
+ </li>
+ <li>
+ <a href="http://bnw.genenetwork.org/">Bayesian Network Web Server</a> at UTHSC
+ </li>
+ <li>
+ <a href="https://www.geneweaver.org/">GeneWeaver</a>
+ </li>
+ <li>
+ <a href="https://phenogen.org/">PhenoGen</a> at University of Colorado
+ </li>
+ <li>
+ <a href="http://www.webgestalt.org/">WebGestalt</a> at Baylor
+ </li>
</ul>
</ul>
<ul>
<li>GeneNetwork hosted portals</li>
<ul>
- <li><a href="https://www.opar.io/">Omics Portal For Addiction Research</a></li>
- <li><a href="https://msk.genenetwork.org/">GN4MSK musculoskeletal</a></li>
- <li><a href="https://genecup.org/">GeneCup: Mining PubMed for Gene Relationships using Custom Ontologies</a></li>
+ <li>
+ <a href="https://www.opar.io/">Omics Portal For Addiction Research</a>
+ </li>
+ <li>
+ <a href="https://msk.genenetwork.org/">GN4MSK musculoskeletal</a>
+ </li>
+ <li>
+ <a href="https://genecup.org/">GeneCup: Mining PubMed for Gene Relationships using Custom Ontologies</a>
+ </li>
</ul>
</ul>
</section>
</div>
</div>
</div>
-
-{%endblock%}
-
+{% endblock %}
{% block js %}
-
-<script src="/static/new/javascript/search_autocomplete.js"></script>
-<script src="/static/new/javascript/dataset_select_menu_orig.js"></script>
-
- <script type="text/javascript">
+ <script src="/static/new/javascript/search_autocomplete.js"></script>
+ <script src="/static/new/javascript/dataset_select_menu_orig.js"></script>
+ <script type="text/javascript">
$(document).ready(function() {
const urlParams = new URLSearchParams(window.location.search)
@@ -461,9 +592,8 @@
})
});
-</script>
- <script type="text/javascript">
-
+ </script>
+ <script type="text/javascript">
$(document).on('submit', '#searchform', function(event){
event.preventDefault()
@@ -482,7 +612,6 @@ $(document).on('submit', '#searchform', function(event){
});
</script>
-
<script>
function pressed(e) {
// Has the enter key been pressed?
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-21 18:48:31 +0000