Namespace all modules under gn2.

We move all modules under a gn2 directory. This is important for
"correct" packaging and deployment as a Guix service.

1 files changed, 68 insertions, 0 deletions

diff --git a/gn2/wqflask/static/new/javascript/create_manhattan_plot.js b/gn2/wqflask/static/new/javascript/create_manhattan_plot.js
new file mode 100644
index 00000000..30af484d
--- /dev/null
+++ b/gn2/wqflask/static/new/javascript/create_manhattan_plot.js
@@ -0,0 +1,68 @@
+// Generated by CoffeeScript 1.8.0
+var create_manhattan_plot;
+
+create_manhattan_plot = function() {
+  var chrrect, data, h, halfh, margin, mychart, totalh, totalw, w;
+  h = 500;
+  w = 1200;
+  margin = {
+    left: 60,
+    top: 40,
+    right: 40,
+    bottom: 40,
+    inner: 5
+  };
+  halfh = h + margin.top + margin.bottom;
+  totalh = halfh * 2;
+  totalw = w + margin.left + margin.right;
+  console.log("js_data:", js_data);
+  mychart = lodchart().lodvarname("lod.hk").height(h).width(w).margin(margin).ylab("LOD score").manhattanPlot(js_data.manhattan_plot);
+  data = js_data.json_data;
+  d3.select("div#topchart").datum(data).call(mychart);
+  chrrect = mychart.chrSelect();
+  chrrect.on("mouseover", function() {
+    return d3.select(this).attr("fill", "#E9CFEC");
+  }).on("mouseout", function(d, i) {
+    return d3.select(this).attr("fill", function() {
+      if (i % 2) {
+        return "#F1F1F9";
+      }
+      return "#FBFBFF";
+    });
+  });
+  return mychart.markerSelect().on("click", function(d) {
+    var r;
+    r = d3.select(this).attr("r");
+    return d3.select(this).transition().duration(500).attr("r", r * 3).transition().duration(500).attr("r", r);
+  });
+};
+
+create_manhattan_plot();
+
+$("#export").click((function(_this) {
+  return function() {
+    var filename, form, svg, svg_xml;
+    svg = $("#topchart").find("svg")[0];
+    svg_xml = (new XMLSerializer).serializeToString(svg);
+    console.log("svg_xml:", svg_xml);
+    filename = "manhattan_plot_" + js_data.this_trait;
+    form = $("#exportform");
+    form.find("#data").val(svg_xml);
+    form.find("#filename").val(filename);
+    return form.submit();
+  };
+})(this));
+
+$("#export_pdf").click((function(_this) {
+  return function() {
+    var filename, form, svg, svg_xml;
+    svg = $("#topchart").find("svg")[0];
+    svg_xml = (new XMLSerializer).serializeToString(svg);
+    console.log("svg_xml:", svg_xml);
+    filename = "manhattan_plot_" + js_data.this_trait;
+    form = $("#exportpdfform");
+    form.find("#data").val(svg_xml);
+    form.find("#filename").val(filename);
+    return form.submit();
+  };
+})(this));