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| author | Arun Isaac | 2023-12-29 18:55:37 +0000 |
|---|---|---|
| committer | Arun Isaac | 2023-12-29 19:01:46 +0000 |
| commit | 204a308be0f741726b9a620d88fbc22b22124c81 (patch) | |
| tree | b3cf66906674020b530c844c2bb4982c8a0e2d39 /gn2/wqflask/static/new/javascript/box.js | |
| parent | 83062c75442160427b50420161bfcae2c5c34c84 (diff) | |
| download | genenetwork2-204a308be0f741726b9a620d88fbc22b22124c81.tar.gz | |
Namespace all modules under gn2.
We move all modules under a gn2 directory. This is important for "correct" packaging and deployment as a Guix service.
Diffstat (limited to 'gn2/wqflask/static/new/javascript/box.js')
| -rw-r--r-- | gn2/wqflask/static/new/javascript/box.js | 307 |
1 files changed, 307 insertions, 0 deletions
diff --git a/gn2/wqflask/static/new/javascript/box.js b/gn2/wqflask/static/new/javascript/box.js new file mode 100644 index 00000000..aae80f05 --- /dev/null +++ b/gn2/wqflask/static/new/javascript/box.js @@ -0,0 +1,307 @@ +//Taken from http://bl.ocks.org/mbostock/4061502 + +(function() { + +// Inspired by http://informationandvisualization.de/blog/box-plot +d3.box = function() { + var width = 1, + height = 1, + duration = 0, + domain = null, + value = Number, + whiskers = boxWhiskers, + quartiles = boxQuartiles, + tickFormat = null; + + // For each small multiple… + function box(g) { + g.each(function(d, i) { + console.log("d:", d) + console.log("domain:", domain) + d = d.map(value).sort(d3.ascending); + var g = d3.select(this), + n = d.length, + min = d[0], + max = d[n - 1]; + + // Compute quartiles. Must return exactly 3 elements. + var quartileData = d.quartiles = quartiles(d); + + // Compute whiskers. Must return exactly 2 elements, or null. + var whiskerIndices = whiskers && whiskers.call(this, d, i), + whiskerData = whiskerIndices && whiskerIndices.map(function(i) { return d[i]; }); + + // Compute outliers. If no whiskers are specified, all data are "outliers". + // We compute the outliers as indices, so that we can join across transitions! + var outlierIndices = whiskerIndices + ? d3.range(0, whiskerIndices[0]).concat(d3.range(whiskerIndices[1] + 1, n)) + : d3.range(n); + + // Compute the new x-scale. + var x1 = d3.scale.linear() + .domain(domain && domain.call(this, d, i) || [min, max]) + .range([height, 0]); + + // Retrieve the old x-scale, if this is an update. + var x0 = this.__chart__ || d3.scale.linear() + .domain([0, Infinity]) + .range(x1.range()); + + // Stash the new scale. + this.__chart__ = x1; + + // Note: the box, median, and box tick elements are fixed in number, + // so we only have to handle enter and update. In contrast, the outliers + // and other elements are variable, so we need to exit them! Variable + // elements also fade in and out. + + // Update center line: the vertical line spanning the whiskers. + var center = g.selectAll("line.center") + .data(whiskerData ? [whiskerData] : []); + + center.enter().insert("line", "rect") + .attr("class", "center") + .attr("x1", width / 2) + .attr("y1", function(d) { return x0(d[0]); }) + .attr("x2", width / 2) + .attr("y2", function(d) { return x0(d[1]); }) + .style("opacity", 1e-6) + .transition() + .duration(duration) + .style("opacity", 1) + .attr("y1", function(d) { return x1(d[0]); }) + .attr("y2", function(d) { return x1(d[1]); }); + + center.transition() + .duration(duration) + .style("opacity", 1) + .attr("y1", function(d) { return x1(d[0]); }) + .attr("y2", function(d) { return x1(d[1]); }); + + center.exit().transition() + .duration(duration) + .style("opacity", 1e-6) + .attr("y1", function(d) { return x1(d[0]); }) + .attr("y2", function(d) { return x1(d[1]); }) + .remove(); + + // Update innerquartile box. + var box = g.selectAll("rect.box") + .data([quartileData]); + + box.enter().append("rect") + .attr("class", "box") + .attr("x", 0) + .attr("y", function(d) { return x0(d[2]); }) + .attr("width", width) + .attr("height", function(d) { return x0(d[0]) - x0(d[2]); }) + .transition() + .duration(duration) + .attr("y", function(d) { return x1(d[2]); }) + .attr("height", function(d) { return x1(d[0]) - x1(d[2]); }); + + box.transition() + .duration(duration) + .attr("y", function(d) { return x1(d[2]); }) + .attr("height", function(d) { return x1(d[0]) - x1(d[2]); }); + + // Update median line. + var medianLine = g.selectAll("line.median") + .data([quartileData[1]]); + + medianLine.enter().append("line") + .attr("class", "median") + .attr("x1", 0) + .attr("y1", x0) + .attr("x2", width) + .attr("y2", x0) + .transition() + .duration(duration) + .attr("y1", x1) + .attr("y2", x1); + + medianLine.transition() + .duration(duration) + .attr("y1", x1) + .attr("y2", x1); + + // Update whiskers. + var whisker = g.selectAll("line.whisker") + .data(whiskerData || []); + + whisker.enter().insert("line", "circle, text") + .attr("class", "whisker") + .attr("x1", 0) + .attr("y1", x0) + .attr("x2", width) + .attr("y2", x0) + .style("opacity", 1e-6) + .transition() + .duration(duration) + .attr("y1", x1) + .attr("y2", x1) + .style("opacity", 1); + + whisker.transition() + .duration(duration) + .attr("y1", x1) + .attr("y2", x1) + .style("opacity", 1); + + whisker.exit().transition() + .duration(duration) + .attr("y1", x1) + .attr("y2", x1) + .style("opacity", 1e-6) + .remove(); + + // Update outliers. + var outlier = g.selectAll("circle.outlier") + .data(outlierIndices, Number); + + outlier.enter().insert("circle", "text") + .attr("class", "outlier") + .attr("r", 5) + .attr("cx", width / 2) + .attr("cy", function(i) { return x0(d[i]); }) + .style("opacity", 1e-6) + .transition() + .duration(duration) + .attr("cy", function(i) { return x1(d[i]); }) + .style("opacity", 1); + + outlier.transition() + .duration(duration) + .attr("cy", function(i) { return x1(d[i]); }) + .style("opacity", 1); + + outlier.exit().transition() + .duration(duration) + .attr("cy", function(i) { return x1(d[i]); }) + .style("opacity", 1e-6) + .remove(); + + // Compute the tick format. + var format = tickFormat || x1.tickFormat(8); + + // Update box ticks. + var boxTick = g.selectAll("text.box") + .data(quartileData); + + console.log("quartileData:", quartileData); + + boxTick.enter().append("text") + .attr("class", "box") + .attr("dy", ".3em") + .attr("dx", function(d, i) { return i & 1 ? 6 : -6 }) + .attr("x", function(d, i) { return i & 1 ? width : 0 }) + .attr("y", x0) + .attr("text-anchor", function(d, i) { return i & 1 ? "start" : "end"; }) + .text(format) + .transition() + .duration(duration) + .attr("y", x1); + + boxTick.transition() + .duration(duration) + .text(format) + .attr("y", x1); + + // Update whisker ticks. These are handled separately from the box + // ticks because they may or may not exist, and we want don't want + // to join box ticks pre-transition with whisker ticks post-. + var whiskerTick = g.selectAll("text.whisker") + .data(whiskerData || []); + + whiskerTick.enter().append("text") + .attr("class", "whisker") + .attr("dy", ".3em") + .attr("dx", 6) + .attr("x", width) + .attr("y", x0) + .text(format) + .style("opacity", 1e-6) + .transition() + .duration(duration) + .attr("y", x1) + .style("opacity", 1); + + whiskerTick.transition() + .duration(duration) + .text(format) + .attr("y", x1) + .style("opacity", 1); + + whiskerTick.exit().transition() + .duration(duration) + .attr("y", x1) + .style("opacity", 1e-6) + .remove(); + }); + d3.timer.flush(); + } + + box.width = function(x) { + if (!arguments.length) return width; + width = x; + return box; + }; + + box.height = function(x) { + if (!arguments.length) return height; + height = x; + return box; + }; + + box.tickFormat = function(x) { + if (!arguments.length) return tickFormat; + tickFormat = x; + return box; + }; + + box.duration = function(x) { + if (!arguments.length) return duration; + duration = x; + return box; + }; + + box.domain = function(x) { + if (!arguments.length) return domain; + domain = x == null ? x : d3.functor(x); + return box; + }; + + box.value = function(x) { + if (!arguments.length) return value; + value = x; + return box; + }; + + box.whiskers = function(x) { + if (!arguments.length) return whiskers; + whiskers = x; + return box; + }; + + box.quartiles = function(x) { + if (!arguments.length) return quartiles; + quartiles = x; + return box; + }; + + return box; +}; + +function boxWhiskers(d) { + return [0, d.length - 1]; +} + +function boxQuartiles(d) { + return [ + d3.quantile(d, .25), + d3.quantile(d, .5), + d3.quantile(d, .75) + ]; +} + +})(); \ No newline at end of file |
