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Diffstat (limited to 'ratspub_keywords.py')
-rw-r--r-- | ratspub_keywords.py | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/ratspub_keywords.py b/ratspub_keywords.py new file mode 100644 index 0000000..6d63174 --- /dev/null +++ b/ratspub_keywords.py @@ -0,0 +1,33 @@ +addiction_d = {"reward":"reward|hedonic|incentive|intracranial self stimulation|ICSS|reinforcement|reinforcing|conditioned place preference|CPP|self administration|self administered|drug reinforced|operant|instrumental response", + "aversion":"aversion|aversive|CTA|conditioned taste aversion", + "withdrawal":"withdrawal", + "relapse":"relapse|reinstatement|craving|drug seeking|seeking", + "sensitization":"sensitization", + "addiction":"addiction|addictive|drug abuse|punishment|compulsive|escalation", + "dependence":"dependence", + "intoxication":"intoxication|binge" + } +drug_d = {"alcohol":"alcohol|alcoholism|alcoholic|alcoholics", + "nicotine":"smoking|nicotine|tobacco|smoker|smokers", + "cocaine":"cocaine", + "opioid":"opioid|opioids|fentanyl|oxycodone|oxycontin|heroin|morphine|methadone|buprenorphine|vicodin|hydrocodone|hycodan|kadian|percoset|hydromorphone|naloxone|codeine|suboxone|tramadol|kratom|ultram", + "amphetamine":"methamphetamine|amphetamine|METH|AMPH", + "cannabinoid":"endocannabinoid|cannabinoids|cannabis|endocannabinoids|marijuana|cannabidiol|cannabinoid|tetrahydrocannabinol|thc|thc 9|Oleoylethanolamide|palmitoylethanolamide|acylethanolamides" + } +brain_d ={"cortex":"cortex|prefrontal|pfc|mPFC|vmpfc|corticostriatal|cortico limbic|corticolimbic|prl|prelimbic|infralimbic|orbitofrontal|cingulate|cerebral|insular|insula", + "striatum":"striatum|STR|striatal|caudate|putamen|basal ganglia|globus pallidus|GPI", + "accumbens":"accumbens|accumbal|shell|core|Nacc|NacSh|acbs|acbc", + "hippocampus":"hippocampus|hippocampal|hipp|hip|ca1|ca3|dentate gyrus|subiculum|vhipp|dhpc|vhpc", + "amygdala":"amygdala|cea|bla|amy|cna", + "VTA":"ventral tegmental|vta|pvta|mesolimbic|limbic|midbrain|mesoaccumbens|mesoaccumbal", + "habenula":"habenula|lhb|mhb", + "hypothalamus":"hypothalamus|hypothalamic|PVN|paraventricular nucleus" + } +# brain region has too many short acronyms to just use the undic function, so search PubMed using the following +brain_query_term="cortex|accumbens|striatum|amygadala|hippocampus|tegmental|mesolimbic|infralimbic|prelimbic|habenula" +function_d={"signalling":"signalling|signaling|phosphorylation|glycosylation", + "transcription":"transcription|methylation|hypomethylation|hypermethylation|histone|ribosome", + "neuroplasticity":"neuroplasticity|plasticity|long term potentiation|LTP|long term depression|LTD|synaptic|epsp|epsc|neurite|neurogenesis|boutons|mIPSC|IPSC|IPSP", + "neurotransmission": "neurotransmission|neuropeptides|neuropeptide|glutamate|glutamatergic|GABA|GABAergic|dopamine|dopaminergic|DAergic|cholinergic|nicotinic|muscarinic|serotonergic|serotonin|5 ht|acetylcholine", + } +#"regulation":"increased|decreased|regulated|inhibited|stimulated", |