mv some files to utility

1 files changed, 4 insertions, 0 deletions

diff --git a/utility/topGene_step0_extract_gene_alias_from_gene_info.sh b/utility/topGene_step0_extract_gene_alias_from_gene_info.sh
new file mode 100755
index 0000000..4d3118b
--- /dev/null
+++ b/utility/topGene_step0_extract_gene_alias_from_gene_info.sh
@@ -0,0 +1,4 @@
+#!/bin/bash
+#-e "s/\(|\)/ /g"  -e "s/\[|\]/ /g" 
+grep ^9606 ~/Downloads/gene_info |cut -f 3,5,12|grep -v ^LOC|grep -v -i pseudogene |sed -e "s/\t-//"  -e "s/\t/|/2"  -e "s/\t-//"  -e "s/\t/\|/" -e "s/(\|)\|\[\|\]\|{\|}/ /g" | sort >ncbi_gene_symb_syno_name_txid9606.txt 
+