aboutsummaryrefslogtreecommitdiff
path: root/server.py
diff options
context:
space:
mode:
authorHao Chen2020-04-22 08:24:16 -0500
committerHao Chen2020-04-22 08:24:16 -0500
commit2f58b4d9989cd319cca86b24edcc6eaa45a49c7b (patch)
tree293cdde096632a304aa9e02b1e5e133cf71e4008 /server.py
parentdae63118271428a08efc402cb57ffc95c5f0a856 (diff)
downloadgenecup-2f58b4d9989cd319cca86b24edcc6eaa45a49c7b.tar.gz
minor ui tweaks
Diffstat (limited to 'server.py')
-rwxr-xr-xserver.py10
1 files changed, 5 insertions, 5 deletions
diff --git a/server.py b/server.py
index fd1285b..c61ca5a 100755
--- a/server.py
+++ b/server.py
@@ -447,7 +447,7 @@ def tableview():
gene_name=gene_name.replace("'","")
gene_name = gene_name+added
num_gene = gene_name.count(',')+1
- message3="<b> Notes: </b><li> Click on the abstract count to read sentences linking the keyword and the gene. <li> Click on a gene to search its relations with top 200 addiction genes. <li> Click on a keyword to see the terms included in the search. <li>View the results in <a href='cytoscape'><b> a graph.</b></a>"
+ message3="<b> Actions: </b><li> <font color=\"red\">Click on the abstract count to read sentences linking the keyword and the gene.</font> <li> Click on a gene to search its relations with top 200 addiction genes. <li> Click on a keyword to see the terms included in the search. <li>View the results in <a href='cytoscape'><b> a graph.</b></a>"
return render_template('tableview.html', nodata_temp=nodata_temp, num_gene=num_gene,session_path = session['path'], jedges=jedges, jnodes=jnodes,gene_name=gene_name, message3=message3)
@app.route("/tableview0")
@@ -506,7 +506,7 @@ def userarchive():
filename=filename[0:4]+"-"+filename[5:7]+"-"+filename[8:13]+":"+filename[14:16]+":"+filename[17:19]
directory_list.append(filename)
len_dir = len(directory_list)
- message3="<b> Note: </b><li> Click on the Date/Time to view archived results. <li>The Date/Time are based on US Central time zone. "
+ message3="<b> Actions: </b><li> Click on the Date/Time to view archived results. <li>The Date/Time are based on US Central time zone. "
return render_template('userarchive.html', len_dir=len_dir, gene_list = gene_list, folder_list=folder_list, directory_list=directory_list, session_id=session_id, message3=message3)
# delete this search
@@ -575,12 +575,12 @@ def date():
for i in range(0,num_gene):
gene_list.append(gene_name1.split(',')[i])
session['query'] = gene_list
- message3="<b> Notes: </b><li>Click on the keywords to see the indicated number of abstracts <li> Click on a gene to search its relations with top 200 addiction genes<li>Click on a keyword to see the terms included in the search<li>Hover your pointer over a node will hide other links <li>Nodes can be moved around for better visibility, reload the page will restore the original layout<li> View the results in <a href='cytoscape'><b>a graph.</b></a>"
+ message3="<b> Actions: </b><li><font color=\"red\">Click on the keywords to see the indicated number of abstracts </font><li> Click on a gene to search its relations with top 200 addiction genes<li>Click on a keyword to see the terms included in the search<li>Hover your pointer over a node to hide other links <li>Nodes can be moved around for better visibility, reload the page will restore the original layout<li> View the results in <a href='cytoscape'><b>a graph.</b></a>"
return render_template('tableview.html', title='',nodata_temp=nodata_temp, date=select_date, num_gene=num_gene,session_path = session['path'], jedges=jedges, jnodes=jnodes,gene_name=gene_name, message3=message3)
@app.route('/cytoscape')
def cytoscape():
- message2="<b> Notes: </b><li>Click on a line to see the indicated number of abstracts <li> Click on a gene to search its relations with top 200 addiction genes<li>Click on a keyword to see the terms included in the search<li>Hover your pointer over a node will hide other links <li>Nodes can be moved around for better visibility, reload the page will restore the original layout<li>View the results in <a href='tableview'><b>a table. </b></a>"
+ message2="<b> Notes: </b><li><font color=\"red\">Click on a line to see the indicated number of abstracts </font> <li> Click on a gene to search its relations with top 200 addiction genes<li>Click on a keyword to see the terms included in the search<li>Hover your pointer over a node to hide other links <li>Nodes can be moved around for better visibility, reload the page will restore the original layout<li>View the results in <a href='tableview'><b>a table. </b></a>"
with open(session['path']+"_cy","r") as f:
elements=f.read()
with open(session['path']+"_0link","r") as z:
@@ -616,7 +616,7 @@ def sentences():
out_pos = ""
out_neg = ""
num_abstract = 0
- stress_cellular = "<br><br><br>"+"<b>Sentence(s) describing celluar stress (classified using a deep learning model):</b><hr>"
+ stress_cellular = "<br><br><br>"+"</ol><b>Sentence(s) describing celluar stress (classified using a deep learning model):</b><hr><ol>"
stress_systemic = "<b>Sentence(s) describing systemic stress (classified using a deep learning model):</b><hr>"
with open(tf_name, "r") as df:
all_sents=df.read()