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| author | Hao Chen | 2019-05-12 06:51:20 -0500 |
|---|---|---|
| committer | Hao Chen | 2019-05-12 06:51:20 -0500 |
| commit | 5abc13ae06b2ce7e53480340a1b9292701dc4ab5 (patch) | |
| tree | 63e4737852d5acccb49f8dd2a7633cb4dbb48b39 /ratspub.py | |
| parent | bc6a6e1d5974cb1c9f8a181728d93dafc531da01 (diff) | |
| download | genecup-5abc13ae06b2ce7e53480340a1b9292701dc4ab5.tar.gz | |
progress working
Diffstat (limited to 'ratspub.py')
| -rwxr-xr-x | ratspub.py | 8 |
1 files changed, 4 insertions, 4 deletions
@@ -106,7 +106,7 @@ drug_d = {"alcohol":"alcohol|alcoholism|alcoholic", "nicotine":"smoking|nicotine|tobacco", "cocaine":"cocaine", "opioid":"opioid|opioids|fentanyl|oxycodone|oxycontin|heroin|morphine|methadone|buprenorphine|vicodin|hydrocodone|hycodan|kadian|percoset|hydromorphone|naloxone|codeine|suboxone|tramadol|kratom", - "amphetamine":"methamphetamine|amphetamine|METH", + "amphetamine":"methamphetamine|amphetamine|METH|AMPH", "cannabinoid":"endocannabinoid|cannabinoids|endocannabinoids|marijuana|cannabidiol|cannabinoid|tetrahydrocannabinol|thc|thc 9|Oleoylethanolamide|palmitoylethanolamide|acylethanolamides" } drug=undic(drug_d) @@ -121,11 +121,11 @@ brain_d ={"cortex":"cortex|prefrontal|pfc|mPFC|vmpfc|corticostriatal|cortico lim # brain region has too many short acronyms to just use the undic function, so search PubMed using the following brain="cortex|accumbens|striatum|amygadala|hippocampus|tegmental|mesolimbic|infralimbic|prelimbic" -function_d={"neuroplasticity":"neuroplasticity|plasticity|long term potentiation|LTP|long term depression|LTD|synaptic|epsp|epsc|neurite|neurogenesis|boutons|mIPSC|IPSC|IPSP", - "signalling":"signalling|signaling|phosphorylation|glycosylation", -# "regulation":"increased|decreased|regulated|inhibited|stimulated", +function_d={"signalling":"signalling|signaling|phosphorylation|glycosylation", "transcription":"transcription|methylation|hypomethylation|hypermethylation|histone|ribosome", + "neuroplasticity":"neuroplasticity|plasticity|long term potentiation|LTP|long term depression|LTD|synaptic|epsp|epsc|neurite|neurogenesis|boutons|mIPSC|IPSC|IPSP", "neurotransmission": "neurotransmission|neuropeptides|neuropeptide|glutamate|glutamatergic|GABA|GABAergic|dopamine|dopaminergic|DAergic|cholinergic|nicotinic|muscarinic|serotonergic|serotonin|5 ht|acetylcholine", +# "regulation":"increased|decreased|regulated|inhibited|stimulated", } function=undic(function_d) |