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authorHao Chen2019-05-21 16:36:07 -0500
committerHao Chen2019-05-21 16:36:07 -0500
commit2ad607c82756d39749056cf68a6b57cde50d5d3c (patch)
tree0b70e2cca7b653ea8468ccc53028ecae9b53b532 /ratspub.py
parente87aa54962f20d93e3cea18f425bb3f820768e63 (diff)
downloadgenecup-2ad607c82756d39749056cf68a6b57cde50d5d3c.tar.gz
url for GWAS nodes
Diffstat (limited to 'ratspub.py')
-rwxr-xr-xratspub.py4
1 files changed, 3 insertions, 1 deletions
diff --git a/ratspub.py b/ratspub.py
index 9b24e9d..8ee1f74 100755
--- a/ratspub.py
+++ b/ratspub.py
@@ -86,11 +86,13 @@ def searchArchived(sets, query):
for key in catCnt.keys():
if sets=='gwas':
nc=nodecolor["gwas"]
+ nodes += "{ data: { id: '" + key + "', nodecolor: '" + nc + "', url:'https://www.ebi.ac.uk/gwas/search?query="+key.replace("_GWAS","")+"' } },\n"
elif key in drug_d.keys():
nc=nodecolor["drug"]
+ nodes += "{ data: { id: '" + key + "', nodecolor: '" + nc + "', url:'/shownode?node="+key+"' } },\n"
else:
nc=nodecolor["addiction"]
- nodes += "{ data: { id: '" + key + "', nodecolor: '" + nc + "', nodetype: 'top150', url:'/shownode?node="+key+"' } },\n"
+ nodes += "{ data: { id: '" + key + "', nodecolor: '" + nc + "', url:'/shownode?node="+key+"' } },\n"
edgeID=dataFile+"|"+query+"|"+key
edges+="{ data: { id: '" + edgeID+ "', source: '" + query + "', target: '" + key + "', sentCnt: " + str(catCnt[key]) + ", url:'/sentences?edgeID=" + edgeID + "' } },\n"
return(nodes+edges)