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| author | Pjotr Prins | 2026-03-27 11:12:26 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2026-03-27 11:12:26 +0100 |
| commit | 8065e026dc1b410e167eacbb7545c07abdf3b543 (patch) | |
| tree | f2ba1ef08a0decf88216a741b210a544b935bcb4 /more_functions.py | |
| parent | c74739ad59abc0f99c213119964fa2c941c1ed31 (diff) | |
| parent | c70a27ae64463eac43f0e4421e9d8cce9d4200ba (diff) | |
| download | genecup-8065e026dc1b410e167eacbb7545c07abdf3b543.tar.gz | |
Merge my older production changes [Pjotr]
Diffstat (limited to 'more_functions.py')
| -rwxr-xr-x | more_functions.py | 3 |
1 files changed, 0 insertions, 3 deletions
diff --git a/more_functions.py b/more_functions.py index 7c21c2a..8162acc 100755 --- a/more_functions.py +++ b/more_functions.py @@ -3,11 +3,9 @@ from nltk.tokenize import sent_tokenize import os import re -from nltk.util import pr from addiction_keywords import * from gene_synonyms import * import ast -from flask import session global pubmed_path @@ -29,7 +27,6 @@ def getabstracts(gene,query): + " | xtract -pattern PubmedArticle -element MedlineCitation/PMID,ArticleTitle,AbstractText|sed \"s/-/ /g\"").read() return(abstracts) -sentences_ls=[] def getSentences(gene, sentences_ls): out=str() # Keep the sentence only if it contains the gene |
