diff options
Diffstat (limited to 'sourcecodes/run.sh')
| -rw-r--r-- | sourcecodes/run.sh | 24 |
1 files changed, 15 insertions, 9 deletions
diff --git a/sourcecodes/run.sh b/sourcecodes/run.sh index 95e5f417..344b7591 100644 --- a/sourcecodes/run.sh +++ b/sourcecodes/run.sh @@ -1,20 +1,26 @@ #!/bin/bash -d=`dirname $0` +#d=`dirname $0` #ess=1 -DIR="$d/data/$1" -DIR_1="$d/data/$1/" +#DIR="$d/data/$1" +#DIR_1="$d/data/$1/" +cd /var/lib/genenet/bnw -mkdir -p $DIR + +mkdir -p /var/lib/genenet/bnw/$1 maxparent=$2 k=$3 THR=$4 -./network_score $d/data/$1continuous_input.txt $d/data/$1ban.txt $d/data/$1white.txt $maxparent $DIR +./network_score /var/lib/genenet/bnw/$1continuous_input.txt /var/lib/genenet/bnw/$1ban.txt /var/lib/genenet/bnw/$1white.txt $maxparent /var/lib/genenet/bnw/$1 + +./k-best/src/data2netk_poster.sh /var/lib/genenet/bnw/$1continuous_input.txt /var/lib/genenet/bnw/$1 $k $maxparent -$d/k-best/src/data2netk_poster.sh $d/data/$1continuous_input.txt $DIR $k $maxparent +./structure /var/lib/genenet/bnw/$1continuous_input.txt /var/lib/genenet/bnw/$1/postProbEachEdge.txt /var/lib/genenet/bnw/$1structure_input_temp.txt /var/lib/genenet/bnw/$1structure_input.txt $THR -./structure $d/data/$1continuous_input.txt $DIR/postProbEachEdge.txt $d/data/$1structure_input_temp.txt $d/data/$1structure_input.txt $THR +rm -r /var/lib/genenet/bnw/$1 -rm -r $DIR_1* -rmdir $DIR +if [ $k = 1 ] +then + rm -r /var/lib/genenet/bnw/$1structure_input_temp.txt +fi |