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Diffstat (limited to 'sourcecodes/bn_after_upload_gom.php')
| -rw-r--r-- | sourcecodes/bn_after_upload_gom.php | 191 |
1 files changed, 191 insertions, 0 deletions
diff --git a/sourcecodes/bn_after_upload_gom.php b/sourcecodes/bn_after_upload_gom.php new file mode 100644 index 00000000..d7435cfd --- /dev/null +++ b/sourcecodes/bn_after_upload_gom.php @@ -0,0 +1,191 @@ +<?php + //Going to modify this so it just writes the uploaded data to a file. + //Standardization and determining other factors will be performed in + // a Matlab/Octave script. + +include("header_new.inc"); +include("header_batchsearch.inc"); +include("runtime_check.php"); +include("input_validate.php"); +//$searchID=""; +$searchID="YES"; +$UploadValue="NO"; +$TextFile=$HTTP_POST_FILES["MyFile"]["name"]; + + +/////////////Generate a random key///////////////////// +//$alphas=array(); +//$alphas = array_merge(range('A', 'Z'), range('a', 'z')); + +//$al1=rand(0,51); +//$al2=rand(0,51); +//$al3=rand(0,51); + +//$alpha="$alphas[$al1]"."$alphas[$al2]"."$alphas[$al3]"; +//$keyval=$alpha; + + +//if($_POST["My_key"]!="") +// $keyval=$_POST["My_key"]; +// $keyval=valid_keyval($keyval); + +//$sid=$keyval."continuous_input"; +//$dir="./data/"; + +//$TextinFile=$dir.$sid."_orig.txt"; + + +if(isset($HTTP_POST_VARS["searchkey"])) +{ + $searchID=$HTTP_POST_VARS["searchkey"]; + +} + +if($searchID=="") +{ +?> + +<!-- Site navigation menu --> +<ul class="navbar"> + <li><a href="help.php#file_format" target="_blank">Data formatting guidelines</a> + <li><a href="help.php" target="_blank">Help</a> + <li><a href="home.php">Home</a> +</ul> +<?php +} + + +if(isset($HTTP_POST_VARS["MyUpload"])) +{ + $UploadValue=$HTTP_POST_VARS["MyUpload"]; + if ($UploadValue=="YES") + { + if($TextFile!="") + { + // $TextFile = valid_input($TextFile); + $sta=move_uploaded_file($HTTP_POST_FILES['MyFile']['tmp_name'],$TextinFile); + if(!$sta) + { + echo "<script type='text/javascript'> window.alert ('Sorry, error uploading $TextFile.')</script>"; + flush(); + exit(); + } + else + { + $searchID=file_get_contents("$TextinFile"); + //unlink($TextinFile); + + } + + } + + else + { + echo "<script type='text/javascript'> window.alert ('Sorry, please select upload file.')</script>"; + } + } +} + +?> +<div id="outernew"> +<h2><font color=#33339f>Upload data file for structure learning search</font></h2> +<FORM name="key_search" enctype="multipart/form-data" ACTION="bn_file_load_gom.php" METHOD=POST> + +<table align="left" cellspacing="3" cellpadding="1" border="0" width="60%"> +<tr> +<td> +<INPUT style="background-color:#FFFFFF;color:#0000FF" type="file" name="MyFile" size=45 > +<INPUT TYPE="submit" value=" Upload " onclick="return Upload();"> +<INPUT TYPE="hidden" NAME="My_key" value=<?php print($keyval) ?> > +<INPUT TYPE="hidden" name="MyUpload" value="NO"> +</td> +</tr> +<tr> +<td align="left"><font color=#33339f><br>Content of uploaded data file:</font><br> + <textarea name="searchkey" rows="8" cols="100"><?PHP print($searchID)?> </textarea> +</td> +</tr> +<tr> +<td> +<INPUT TYPE="submit" value=" Load example data of immune responses to infection with Chlamydia psittaci " onclick="return demochl();">    +<INPUT TYPE="hidden" NAME="My_key" value=<?php print($keyval) ?> > +</td> +</tr> +<tr> +<td> +<INPUT TYPE="submit" value=" Load example data of a synthetic genetic network with 2 genotypes and 6 traits " onclick="return demo8nodes();">    +<INPUT TYPE="hidden" NAME="My_key" value=<?php print($keyval) ?> > +</td> +</tr> +<tr> +<td> +<INPUT TYPE="submit" value=" Load example data of immune-related gene in the spleens of BXD mice " onclick="return demospnl();">    +<INPUT TYPE="hidden" NAME="My_key" value=<?php print($keyval) ?> > +</td> +</tr> +<tr> +<td> +<INPUT TYPE="submit" value=" Load the ksl dataset from deal " onclick="return demoksl();">    +<INPUT TYPE="hidden" NAME="My_key" value=<?php print($keyval) ?> > +</td> +</tr> +<tr> +<td> +<INPUT TYPE="submit" value=" Load the rat dataset from deal " onclick="return demorat();">    +<INPUT TYPE="hidden" NAME="My_key" value=<?php print($keyval) ?> > +</td> +</tr> +</table> +</FORM> +</div> + +<?php + +if($searchID!="") +{ + //if ($UploadValue=="NO") + //{ + // $fpdata = fopen($dir.$keyval."continuous_input_orig.txt","w"); + // fwrite($fpdata,$searchID); + //} + //$keyval = valid_keyval($keyval); + //shell_exec('./run_scripts/run_prep_input '.$keyval); + $keyval=valid_keyval($_GET["My_key"]); + $parent_number=4; + $k_number=1; + $runtime=exe_time($keyval,$parent_number,$k_number); +?> +<ul class="navbar2"> + <li><a href="executionprogress.php?My_key=<?php print($keyval);?>">Perform Bayesian network modeling using default settings</a> + <li><a href="create_tiers_gom.php?My_key=<?php print($keyval);?>">Go to structure learning settings and the BNW structural constraint interface</a> + <li><a href="remove_variables.php?My_key=<?php print($keyval);?>">Remove variables from data set</a> + <li><a href="javascript:void(0);" +NAME="InputCheck" title="InputCheck" + onClick=window.open("input_check.php?My_key=<?php print($keyval);?>","Rat//ting","width=950,height=270,0,status=0,");>View uploaded variables and data</a> +</ul> +<ul class="navbar"> +<li><a href="help.php" target="_blank">Help</a> +<li><a href="home.php">Home</a> +</ul> +<div id="outernew"> +<p><h3><?php +print("Estimated run time for current dataset using default settings: $runtime seconds"); +?> +<br><br><br><br></h3> +</p> +<br> +<br> +<br> +<br> +<br> +<br> +<br> +</div> +<?php +} +?> + +</body> +</html> + + |