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@@ -4,23 +4,23 @@ This contains the code for the Bayesian Network Webserver (BNW).
 
 The original BNW website is compbio.uthsc.edu/BNW, which currently redirects to BNW_1.2.
 
-The current development version of BNW is compbio.uthsc.edu/BNW_1.21. I am working on the cross-validation/test set predictions in the development version. I also added a couple of usability features.
+The current development version of BNW is compbio.uthsc.edu/BNW_1.21. I added cross-validation/test set predictions in the development version as well as a couple of usability features.
 
-Below are a couple of text files that provide descriptions of the BNW code.
+There are a couple of files here that provide descriptions of the BNW code.
 
 -BNW_file_overview.txt lists the files that are needed to run BNW and gives a brief description of the purpose of each file.
 
 -BNW_data_flow.txt goes through a typical session of BNW describing the order in which codes and scripts are used, as well as when output files are written and the output file format.
 
-There are five branches.
-1) master: This is currently compbio.uthsc.edu/BNW_1.21 on the BNW server.
 
-2) new_server: Branched from master to make changes with the new server.
 
-3) matlab_original (compbio.uthsc.edu/BNW_1.01): This is functionally identical to the original BNW code. The only difference is that unused files were removed.
+There are four branches.
+1) master: This is currently compbio.uthsc.edu/BNW_1.21 on the BNW server.
+
+2) matlab_original (compbio.uthsc.edu/BNW_1.01): This is functionally identical to the original BNW code. The only difference is that unused files were removed.
 
-4) octave_version (compbio.uthsc.edu/BNW_1.02): This should perform similarly to the original version of BNW. However, instead of Matlab, Octave is used and a couple of new features were added.
+3) octave_version (compbio.uthsc.edu/BNW_1.02): This should perform similarly to the original version of BNW. However, instead of Matlab, Octave is used and a couple of new features were added.
 
-5) octave_php_separate (compbio.uthsc.edu/BNW_1.1): The main goal here is to rewrite the code so that all calculations are performed in Octave. PHP code only reads from files and displays figures.  I am making other small changes along the way. This branch could probably be deleted at some point.
+4) octave_php_separate (compbio.uthsc.edu/BNW_1.1): The main goal here is to rewrite the code so that all calculations are performed in Octave. PHP code only reads from files and displays figures.  I am making other small changes along the way. This branch could probably be deleted at some point.