| Age | Commit message (Expand) | Author |
|---|
| 2017-10-26 | Changed SNPs into SNPs/var in output, ref https://github.com/genetics-statist... | Pjotr Prins |
| 2017-10-23 | Travis-ci:•••- Disabled gcc-6 since we develop with later tools anyway
- Turned the release test into a simple integration test
- Adding MacOSX on Travis-ci
Tests: Adding tests for Plink w. LOCO
Safety: Introduce strtok_safe to get rid of segfaults
| Pjotr Prins |
| 2017-10-20 | NaN check only when -debug is used | Pjotr Prins |
| 2017-10-18 | Tests still pass with safe_alloc (which sets the buffers to NaNs on allocation) | Pjotr Prins |
| 2017-10-14 | Travis | Pjotr Prins |
| 2017-10-14 | More travis | Pjotr Prins |
| 2017-10-14 | Travis: more fixes | Pjotr Prins |
| 2017-10-14 | Travis | Pjotr Prins |
| 2017-10-14 | OpenBlas info | Pjotr Prins |
| 2017-10-14 | Travis fixes | Pjotr Prins |
| 2017-10-14 | Older openblas does not like blasint | Pjotr Prins |
| 2017-10-14 | Travis fix | Pjotr Prins |
| 2017-10-14 | More disabling of eigenlib (faster compilation) and avoid OPENBLAS_CONST whic... | Pjotr Prins |
| 2017-10-13 | Refactored debug settings•••Replaced eigenlib_dgemm with fast_dgemm - 10-30% speed gain for GEMMA
| Pjotr Prins |
| 2017-10-13 | Openblas specific include file | Pjotr Prins |
| 2017-10-13 | Replacing first dgemm - tests fail | Pjotr Prins |
| 2017-10-13 | OpenBlas: preparing for dgemm use | Pjotr Prins |
| 2017-10-13 | Fix header for not showing se | Pjotr Prins |
| 2017-10-13 | Disable se for lmm=2, see https://github.com/genetics-statistics/GEMMA/issues/81 | Pjotr Prins |
| 2017-10-13 | Fixed mean and iterations in Plink - now this works | Pjotr Prins |
| 2017-10-13 | Progressbar update | Pjotr Prins |
| 2017-10-13 | Consolidate into ProgressBar into one function and related updates | Pjotr Prins |
| 2017-10-13 | Fix embarrassing bug that broke BIMBAM for larger datasets - found it when po... | Pjotr Prins |
| 2017-10-13 | debug message: minor change | Pjotr Prins |
| 2017-10-13 | Bumped up version. | Peter Carbonetto |
| 2017-10-13 | Change ulong type to long. | Peter Carbonetto |
| 2017-10-13 | Fixed warning with assignment in if statement. | Peter Carbonetto |
| 2017-10-13 | Make sure __ASSERT_VOID_CAST works | Pjotr Prins |
| 2017-10-13 | Removing warnings on debug.h assignment | Pjotr Prins |
| 2017-10-06 | LMM: small cleanup and default to NaN initialization | Pjotr Prins |
| 2017-10-06 | LMM: BIMBAM and PLINK share same LMM code - test pass | Pjotr Prins |
| 2017-10-06 | LMM: lifter genotype parsing for BIMBAM. All tests pass. | Pjotr Prins |
| 2017-10-06 | LMM: lifter line no | Pjotr Prins |
| 2017-10-06 | LMM: lifted out file access | Pjotr Prins |
| 2017-10-06 | Oops: fixed logic problem after removing Oxford data | Pjotr Prins |
| 2017-10-05 | Removed Oxford format as per https://github.com/genetics-statistics/GEMMA/iss... | Pjotr Prins |
| 2017-10-05 | LMM: skip beta (again) with LRT | Pjotr Prins |
| 2017-10-05 | Addresses••• https://github.com/genetics-statistics/GEMMA/issues/81
| Pjotr Prins |
| 2017-10-05 | Adding debug statements on entering functions and added test for issue 58 | Pjotr Prins |
| 2017-10-05 | Added a few checks and info | Pjotr Prins |
| 2017-09-14 | Merge pull request #85 from prasunanand/gsl_version_patch•••check GSL_MINOR_VERSION while compiling | Pjotr Prins |
| 2017-09-14 | check GSL_MINOR_VERSION while compiling | prasun |
| 2017-09-12 | Show GSL and Eigen versions in .log output | Pjotr Prins |
| 2017-08-28 | param.cpp: Set error on error | Pjotr Prins |
| 2017-08-27 | -a•••ReadFile_geno: stop warnings after 10x
| Pjotr Prins |
| 2017-08-27 | Removed large sections of commented out code | Pjotr Prins |
| 2017-08-26 | LULndet: remove bad enforce | Pjotr Prins |
| 2017-08-26 | Debug: only output check on -debug | Pjotr Prins |
| 2017-08-26 | Tests and enforces added related to https://github.com/genetics-statistics/GE... | Pjotr Prins |
| 2017-08-22 | Fix typo intecept -> intercept | Pjotr Prins |
