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path: root/src/lmm.cpp
AgeCommit message (Expand)Author
2022-02-15Control P_yy round-off.Pjotr Prins
2021-08-25Add -lmm 9 test and make sure other file formats workPjotr Prins
2021-08-25iter could go out of bounds in CalcLambda - may explain github #243Pjotr Prins
2021-08-25Make sure P_yy=0 does not fail. Fix undefined iter in loop. Make sure there i...Pjotr Prins
2021-08-22Disable round-off correctionPjotr Prins
2021-08-14Aim at fix ofPjotr Prins
2020-12-15Introduced `-lmm 9` switch for gemma to capture additive effect togetherPjotr Prins
2020-12-15Undo function changePjotr Prins
2020-12-15Using M_LLM? modesPjotr Prins
2020-12-15Using M_LLM? modesPjotr Prins
2020-12-15Removed logl_H1 column for -lmm 3 - see also #237Pjotr Prins
2020-12-15No need to pass lambda by addressPjotr Prins
2020-10-01These variables are introduced in DEBUG modePjotr Prins
2020-09-29Fixing Travis build, remove gcc warnings and bump versionPjotr Prins
2020-05-22Fixes for gcc (GCC) 10.1.0Pjotr Prins
2018-12-10Fixes regression introduced by sharing plink algorithm with BIMBAM.Pjotr Prins
2018-09-15Remove noisy batch_compute messagePjotr Prins
2018-09-06Sometimes a value gets negative zero causing a NaN on the sqrt.Pjotr Prins
2018-09-06More debugging and a performance checkPjotr Prins
2018-09-06More debugging info and raise SIGINT instead of exitPjotr Prins
2018-09-06Further debuggingPjotr Prins
2018-09-01CalcPab notesPjotr Prins
2018-08-31More testingPjotr Prins
2018-08-31Improving readabilityPjotr Prins
2018-08-31Continue debugging calcpabPjotr Prins
2018-08-30Debugging calcPabPjotr Prins
2018-08-26More value checking and bounds checkingPjotr Prins
2018-08-25Number format checking in strict mode. Also fixes #149Pjotr Prins
2018-08-25segfpe handlingPjotr Prins
2018-06-29Merge branch 'master' of github.com:genetics-statistics/GEMMAPjotr Prins
2018-02-28renamed import io.h to gemma_io.hDannyArends
2018-01-27Extra error info on strtok parsing failure - should help supportPjotr Prins
2017-12-12Updated copyright infoPjotr Prins
2017-12-08Legacy mode does not show logl_H1 column in outputPjotr Prins
2017-12-06Some cleanup on matrix checkingPjotr Prins
2017-11-30Fixed never-ending run when analyzing only a single SNP, refPjotr Prins
2017-11-22Remove compiler warnings and add check is_nanPjotr Prins
2017-11-15Nans: introducing checking on mem freePjotr Prins
2017-11-11Fix compiler warningsPjotr Prins
2017-10-26Get rid of compiler warningPjotr Prins
2017-10-23Travis-ci:Pjotr Prins
2017-10-18Tests still pass with safe_alloc (which sets the buffers to NaNs on allocation)Pjotr Prins
2017-10-13Replacing first dgemm - tests failPjotr Prins
2017-10-13OpenBlas: preparing for dgemm usePjotr Prins
2017-10-13Fix header for not showing sePjotr Prins
2017-10-13Disable se for lmm=2, see https://github.com/genetics-statistics/GEMMA/issues/81Pjotr Prins
2017-10-13Fixed mean and iterations in Plink - now this worksPjotr Prins
2017-10-13Fix embarrassing bug that broke BIMBAM for larger datasets - found it when po...Pjotr Prins
2017-10-06LMM: small cleanup and default to NaN initializationPjotr Prins
2017-10-06LMM: BIMBAM and PLINK share same LMM code - test passPjotr Prins
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