diff options
Diffstat (limited to 'src/param.cpp')
| -rw-r--r-- | src/param.cpp | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/src/param.cpp b/src/param.cpp index c81eaf5..dce55e0 100644 --- a/src/param.cpp +++ b/src/param.cpp @@ -337,7 +337,7 @@ void PARAM::ReadFiles(void) { trim_individuals(indicator_cvt, ni_max, mode_debug); if (ReadFile_geno(file_geno, setSnps, W, indicator_idv, indicator_snp, maf_level, miss_level, hwe_level, r2_level, mapRS2chr, - mapRS2bp, mapRS2cM, snpInfo, ns_test) == false) { + mapRS2bp, mapRS2cM, snpInfo, ns_test, mode_debug) == false) { error = true; } gsl_matrix_free(W); @@ -445,7 +445,7 @@ void PARAM::ReadFiles(void) { while (!safeGetline(infile, file_name).eof()) { if (ReadFile_geno(file_name, setSnps, W, indicator_idv, indicator_snp, maf_level, miss_level, hwe_level, r2_level, mapRS2chr, - mapRS2bp, mapRS2cM, snpInfo, ns_test_tmp) == false) { + mapRS2bp, mapRS2cM, snpInfo, ns_test_tmp, mode_debug) == false) { error = true; } @@ -1338,7 +1338,7 @@ void PARAM::ReadGenotypes(gsl_matrix *UtX, gsl_matrix *K, const bool calc_K) { } } else { if (ReadFile_geno(file_geno, indicator_idv, indicator_snp, UtX, K, - calc_K) == false) { + calc_K, mode_debug) == false) { error = true; } } @@ -1358,7 +1358,7 @@ void PARAM::ReadGenotypes(vector<vector<unsigned char>> &Xt, gsl_matrix *K, } } else { if (ReadFile_geno(file_geno, indicator_idv, indicator_snp, Xt, K, calc_K, - ni_test, ns_test) == false) { + ni_test, ns_test, mode_debug) == false) { error = true; } } |