diff options
Diffstat (limited to 'src/lmm.h')
| -rw-r--r-- | src/lmm.h | 5 |
1 files changed, 4 insertions, 1 deletions
@@ -24,6 +24,7 @@ #include "io.h" #include "param.h" #include <functional> +#include <tuple> using namespace std; @@ -41,6 +42,8 @@ public: size_t e_mode; }; +typedef std::tuple<string,std::vector<double> > SnpNameValues; + class LMM { public: @@ -90,7 +93,7 @@ public: void AnalyzeGene(const gsl_matrix *U, const gsl_vector *eval, const gsl_matrix *UtW, const gsl_vector *Utx, const gsl_matrix *W, const gsl_vector *x); - void Analyze(std::function< string(size_t) >& fetch_line, + void Analyze(std::function< SnpNameValues(size_t) >& fetch_snp, const gsl_matrix *U, const gsl_vector *eval, const gsl_matrix *UtW, const gsl_vector *Uty, const gsl_matrix *W, const gsl_vector *y, |