diff options
Diffstat (limited to 'src/lmm.cpp')
| -rw-r--r-- | src/lmm.cpp | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/src/lmm.cpp b/src/lmm.cpp index 44f2a55..08b4d41 100644 --- a/src/lmm.cpp +++ b/src/lmm.cpp @@ -2018,7 +2018,7 @@ void LMM::mdb_analyze(std::function< SnpNameValues2(size_t) >& fetch_snp, auto success = get<0>(tup); if (!success) continue; - // typedef tuple< bool,MarkerChrPos,vector<double> > SnpNameValues2; + // typedef tuple< bool,MarkerInfo,vector<double> > SnpNameValues2; // auto marker = get<1>(tup); // auto chr = get<2>(tup); // auto mpos = get<3>(tup); @@ -2216,7 +2216,7 @@ void LMM::mdb_calc_gwa(const gsl_matrix *U, const gsl_vector *eval, // uint8_t chr; vector<double> gs; - MarkerChrPos markerinfo; + MarkerInfo markerinfo; if (success) { size_t num_floats = value.size() / sizeof(float); @@ -2255,7 +2255,7 @@ void LMM::mdb_calc_gwa(const gsl_matrix *U, const gsl_vector *eval, size_t n_miss = 0; // count NAs: FIXME double maf = compute_maf(ni_total, ni_test, n_miss, gs.data()); - markerinfo = MarkerChrPos { .name=marker,.chr=chr,.pos=pos,.line_no=num }; + markerinfo = MarkerInfo { .name=marker,.chr=chr,.pos=pos,.line_no=num }; // cout << "!!!!" << size << marker << ": af" << maf << " " << gs[0] << "," << gs[1] << "," << gs[2] << "," << gs[3] << endl; } |