diff options
Diffstat (limited to 'src/ldr.cpp')
| -rw-r--r-- | src/ldr.cpp | 18 |
1 files changed, 9 insertions, 9 deletions
diff --git a/src/ldr.cpp b/src/ldr.cpp index a1e5791..f0a1b37 100644 --- a/src/ldr.cpp +++ b/src/ldr.cpp @@ -1,17 +1,17 @@ /* Genome-wide Efficient Mixed Model Association (GEMMA) Copyright (C) 2011-2017, Xiang Zhou - + This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - + This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. - + You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>. */ @@ -24,7 +24,7 @@ #include <cmath> #include <iostream> #include <stdio.h> -#include <stdlib.h> +#include <stdlib.h> #include <ctime> #include <cstring> #include <algorithm> @@ -51,7 +51,7 @@ using namespace Eigen; void LDR::CopyFromParam (PARAM &cPar) { a_mode=cPar.a_mode; d_pace=cPar.d_pace; - + file_bfile=cPar.file_bfile; file_geno=cPar.file_geno; file_out=cPar.file_out; @@ -62,11 +62,11 @@ void LDR::CopyFromParam (PARAM &cPar) { ni_test=cPar.ni_test; ns_test=cPar.ns_test; n_cvt=cPar.n_cvt; - + indicator_idv=cPar.indicator_idv; indicator_snp=cPar.indicator_snp; snpInfo=cPar.snpInfo; - + return; } @@ -77,7 +77,7 @@ void LDR::CopyToParam (PARAM &cPar) { //X is a p by n matrix. void LDR::VB (const vector<vector<unsigned char> > &Xt, const gsl_matrix *W_gsl, const gsl_vector *y_gsl) { - + // Save gsl_vector and gsl_matrix into Eigen library formats. MatrixXd W(W_gsl->size1, W_gsl->size2); VectorXd y(y_gsl->size); @@ -105,6 +105,6 @@ void LDR::VB (const vector<vector<unsigned char> > &Xt, // Save results. // TO DO. - + return; } |