diff options
Diffstat (limited to 'src/gemma_io.cpp')
| -rw-r--r-- | src/gemma_io.cpp | 16 |
1 files changed, 8 insertions, 8 deletions
diff --git a/src/gemma_io.cpp b/src/gemma_io.cpp index b1bc368..6d33e00 100644 --- a/src/gemma_io.cpp +++ b/src/gemma_io.cpp @@ -688,14 +688,14 @@ bool ReadFile_fam(const string &file_fam, vector<vector<int>> &indicator_pheno, The function returns a `bool` indicating success/failure, but the real outputs are these three modified reference parameters. */ -bool ReadFile_geno(const string &file_geno, const set<string> &setSnps, - const gsl_matrix *W, const vector<int> &indicator_idv, - vector<int> &indicator_snp, const double &maf_level, - const double &miss_level, const double &hwe_level, - const double &r2_level, map<string, string> &mapRS2chr, - map<string, long int> &mapRS2bp, - map<string, double> &mapRS2cM, vector<SNPINFO> &snpInfo, - size_t &ns_test) { +bool ReadFile_bimbam_geno(const string &file_geno, const set<string> &setSnps, + const gsl_matrix *W, const vector<int> &indicator_idv, + vector<int> &indicator_snp, const double &maf_level, + const double &miss_level, const double &hwe_level, + const double &r2_level, map<string, string> &mapRS2chr, + map<string, long int> &mapRS2bp, + map<string, double> &mapRS2cM, vector<SNPINFO> &snpInfo, + size_t &ns_test) { checkpoint("read-file-geno",file_geno); debug_msg("entered"); indicator_snp.clear(); |