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Diffstat (limited to 'doc/code')
| -rw-r--r-- | doc/code/pangemma.md | 14 |
1 files changed, 14 insertions, 0 deletions
diff --git a/doc/code/pangemma.md b/doc/code/pangemma.md index d65245e..223e2ae 100644 --- a/doc/code/pangemma.md +++ b/doc/code/pangemma.md @@ -204,6 +204,20 @@ multiple outputs - in that case we may add filenames. And exits with: **** Checkpoint reached: read-geno-file (normal exit) ``` +# List check points + +When you compile PanGEMMA with debug information + +``` +make debug +``` + +and run a computation with the '-debug' switch it should output the check-points it passes. You should see something like + +``` +**** DEBUG: checkpoint read-geno-file passed with ./example/mouse_hs1940.geno.txt.gz in src/gemma_io.cpp at line 874 in ReadFile_geno +``` + # Other ## Example |