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-rw-r--r--src/lmm.cpp6
-rwxr-xr-xtest/dev_test_suite.sh2
2 files changed, 4 insertions, 4 deletions
diff --git a/src/lmm.cpp b/src/lmm.cpp
index 68d3c4f..a49c8c5 100644
--- a/src/lmm.cpp
+++ b/src/lmm.cpp
@@ -104,10 +104,10 @@ void LMM::WriteFiles() {
}
auto common_header = [&] () {
- if (a_mode != 2)
+ if (a_mode != 2) {
outfile << "beta" << "\t";
-
- outfile << "se" << "\t";
+ outfile << "se" << "\t";
+ }
outfile << "logl_H1" << "\t"; // we may make this an option
diff --git a/test/dev_test_suite.sh b/test/dev_test_suite.sh
index 0fc4423..136ba76 100755
--- a/test/dev_test_suite.sh
+++ b/test/dev_test_suite.sh
@@ -44,7 +44,7 @@ testBXDLMMLikelihoodRatio() {
assertEquals 0 $?
outfn=output/$outn.assoc.txt
- assertEquals "80498" `wc -w < $outfn`
+ assertEquals "73180" `wc -w < $outfn`
assertEquals "3088458212.93" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
}