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author | Pjotr Prins | 2017-10-05 09:18:59 +0000 |
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committer | Pjotr Prins | 2017-10-05 09:19:09 +0000 |
commit | 530488454ae6a35b098b81b45581f88f02d6de0e (patch) | |
tree | 7ee31c78a678ea4fa364267a9de8564faf4b159e /test/dev_test_suite.sh | |
parent | e90c2d25cdb77d41d6587188db9e61cb988f2c78 (diff) | |
download | pangemma-530488454ae6a35b098b81b45581f88f02d6de0e.tar.gz |
Adding debug statements on entering functions and added test for issue 58
Diffstat (limited to 'test/dev_test_suite.sh')
-rwxr-xr-x | test/dev_test_suite.sh | 7 |
1 files changed, 4 insertions, 3 deletions
diff --git a/test/dev_test_suite.sh b/test/dev_test_suite.sh index 9e49251..2bd432e 100755 --- a/test/dev_test_suite.sh +++ b/test/dev_test_suite.sh @@ -2,7 +2,6 @@ gemma=../bin/gemma - # Related to https://github.com/genetics-statistics/GEMMA/issues/78 testBXDStandardRelatednessMatrixKSingularError() { outn=BXDerr @@ -65,10 +64,12 @@ testCenteredRelatednessMatrixKLOCO1() { testUnivariateLinearMixedModelLOCO1() { outn=mouse_hs1940_CD8_LOCO1_lmm rm -f output/$outn.* - $gemma -g ../example/mouse_hs1940.geno.txt.gz -p ../example/mouse_hs1940.pheno.txt \ + $gemma -g ../example/mouse_hs1940.geno.txt.gz \ + -p ../example/mouse_hs1940.pheno.txt \ -n 1 \ -loco 1 \ - -a ../example/mouse_hs1940.anno.txt -k ./output/mouse_hs1940_LOCO1.cXX.txt \ + -a ../example/mouse_hs1940.anno.txt \ + -k ./output/mouse_hs1940_LOCO1.cXX.txt \ -snps ../example/mouse_hs1940_snps.txt -lmm \ -nind 400 \ -debug \ |