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authorPeter Carbonetto2017-06-04 12:06:36 -0500
committerPeter Carbonetto2017-06-04 12:06:36 -0500
commitc1132606169875be6d07b54b30e8ae9446341bc2 (patch)
tree13019a8101d2278ab1a928481979cca9c7ee6009 /src/prdt.h
parent079d7deb888936fe174746d1efd7cd7ed6a511dd (diff)
downloadpangemma-c1132606169875be6d07b54b30e8ae9446341bc2.tar.gz
Removed FORCE_FLOAT from prdt.h/prdt.cpp.
Diffstat (limited to 'src/prdt.h')
-rw-r--r--src/prdt.h23
1 files changed, 9 insertions, 14 deletions
diff --git a/src/prdt.h b/src/prdt.h
index 8af2cee..2da9fd0 100644
--- a/src/prdt.h
+++ b/src/prdt.h
@@ -1,6 +1,6 @@
 /*
-	Genome-wide Efficient Mixed Model Association (GEMMA)
-    Copyright (C) 2011  Xiang Zhou
+    Genome-wide Efficient Mixed Model Association (GEMMA)
+    Copyright (C) 2011-2017, Xiang Zhou
 
     This program is free software: you can redistribute it and/or modify
     it under the terms of the GNU General Public License as published by
@@ -13,31 +13,25 @@
     GNU General Public License for more details.
 
     You should have received a copy of the GNU General Public License
-    along with this program.  If not, see <http://www.gnu.org/licenses/>.
+    along with this program. If not, see <http://www.gnu.org/licenses/>.
 */
 
 #ifndef __PRDT_H__                
 #define __PRDT_H__
 
-
 #include <vector>
 #include <map>
 #include <string.h>
 #include "gsl/gsl_vector.h"
 #include "gsl/gsl_matrix.h"
-
-#ifdef FORCE_FLOAT
-#include "param_float.h"
-#else
 #include "param.h"
-#endif
 
 using namespace std;
 
 class PRDT {
 	
 public:
-	// IO related parameters
+	// IO-related parameters.
 	size_t a_mode;
 	size_t d_pace;
 	
@@ -59,18 +53,19 @@ public:
 	
 	double time_eigen;
 	
-	// Main functions
+	// Main functions.
 	void CopyFromParam (PARAM &cPar);
 	void CopyToParam (PARAM &cPar);
 	void WriteFiles (gsl_vector *y_prdt);
 	void WriteFiles (gsl_matrix *Y_full);
-	void AddBV (gsl_matrix *G, const gsl_vector *u_hat, gsl_vector *y_prdt);
+	void AddBV (gsl_matrix *G, const gsl_vector *u_hat,
+		    gsl_vector *y_prdt);
 	void AnalyzeBimbam (gsl_vector *y_prdt);
 	void AnalyzePlink (gsl_vector *y_prdt);
-	void MvnormPrdt (const gsl_matrix *Y_hat, const gsl_matrix *H, gsl_matrix *Y_full);
+	void MvnormPrdt (const gsl_matrix *Y_hat, const gsl_matrix *H,
+			 gsl_matrix *Y_full);
 };
 
-
 #endif