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| author | Pjotr Prins | 2025-11-30 07:41:48 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2025-11-30 07:41:48 +0100 |
| commit | 882a426c70370e50a521435e1b2175598e0fe411 (patch) | |
| tree | 0a6f5abd5f325aca6d5b39de33654d1a281122bd /src/param.cpp | |
| parent | 16bf371dff5d1ec20a7ce924c3329dd298e10de3 (diff) | |
| download | pangemma-882a426c70370e50a521435e1b2175598e0fe411.tar.gz | |
Fetch ni_total from lmdb
Diffstat (limited to 'src/param.cpp')
| -rw-r--r-- | src/param.cpp | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/src/param.cpp b/src/param.cpp index a720801..05e4a7b 100644 --- a/src/param.cpp +++ b/src/param.cpp @@ -1120,7 +1120,7 @@ void PARAM::CheckData(void) { } // Output some information. - if (file_cor.empty() && file_mstudy.empty() && file_study.empty() && + if (!is_mdb && file_cor.empty() && file_mstudy.empty() && file_study.empty() && a_mode != 15 && a_mode != 27 && a_mode != 28) { cout << "## number of total individuals = " << ni_total << endl; if (a_mode == 43) { @@ -1294,7 +1294,7 @@ void PARAM::ReadBIMBAMGenotypes(gsl_matrix *UtX, gsl_matrix *K, const bool calc_ } void PARAM::MdbCalcKin() { - error = !mdb_calc_kin(file_geno, setKSnps, indicator_snp, a_mode - 20); + error = !mdb_calc_kin(file_geno, is_loco(), indicator_snp, a_mode - 20); return; } |
