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| author | Pjotr Prins | 2025-12-06 11:59:14 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2025-12-06 11:59:14 +0100 |
| commit | 831afe5d67d62b1a1c2be613e78e1c704634621d (patch) | |
| tree | fed2a0dc40fe1bd7e230c94b756caa6755ed2f5a /src/lmm.h | |
| parent | d3c03a392c6374a135c1a97da52b2cb76a178151 (diff) | |
| download | pangemma-831afe5d67d62b1a1c2be613e78e1c704634621d.tar.gz | |
For LOCO we wont use gwassnps
Diffstat (limited to 'src/lmm.h')
| -rw-r--r-- | src/lmm.h | 6 |
1 files changed, 2 insertions, 4 deletions
diff --git a/src/lmm.h b/src/lmm.h index af79f5f..f10996d 100644 --- a/src/lmm.h +++ b/src/lmm.h @@ -129,12 +129,10 @@ public: void mdb_analyze(std::function< SnpNameValues2(size_t) >& fetch_snp, const gsl_matrix *U, const gsl_vector *eval, const gsl_matrix *UtW, const gsl_vector *Uty, - const gsl_matrix *W, const gsl_vector *y, - const set<string> gwasnps, size_t num_markers); + const gsl_matrix *W, const gsl_vector *y, size_t num_markers); void mdb_calc_gwa(const gsl_matrix *U, const gsl_vector *eval, const gsl_matrix *UtW, const gsl_vector *Uty, - const gsl_matrix *W, const gsl_vector *y, - const set<string> gwasnps); + const gsl_matrix *W, const gsl_vector *y); void AnalyzeBimbam(const gsl_matrix *U, const gsl_vector *eval, const gsl_matrix *UtW, const gsl_vector *Uty, const gsl_matrix *W, const gsl_vector *y, |