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author | Pjotr Prins | 2017-08-22 07:56:07 +0000 |
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committer | Pjotr Prins | 2017-08-22 08:01:50 +0000 |
commit | 99527865c00b74a3a48daa2e1e5eb7c71bd861b5 (patch) | |
tree | 313f36729cc5f0e860d4c73f26ddbee5cff0bf4f /src/lapack.h | |
parent | c7cbd8b2d5a06b7b86733719315f9da1638cb32e (diff) | |
download | pangemma-99527865c00b74a3a48daa2e1e5eb7c71bd861b5.tar.gz |
Fixes matrix checks - looking saner now
- Matrix checks as described in https://github.com/genetics-statistics/GEMMA/issues/72
- introduces -strict switch which will exit on certain conditions
- zero small eigenvalues in EigenDecomp_Zeroed which also checks for negative values
- commented out float versions of functions in lapack.cpp (pre-removal)
- reverted on disabled regression tests (GEMMA shows its previous behaviour now)
Diffstat (limited to 'src/lapack.h')
-rw-r--r-- | src/lapack.h | 2 |
1 files changed, 2 insertions, 0 deletions
diff --git a/src/lapack.h b/src/lapack.h index ff02b96..9596667 100644 --- a/src/lapack.h +++ b/src/lapack.h @@ -41,6 +41,8 @@ void lapack_eigen_symmv(gsl_matrix *A, gsl_vector *eval, gsl_matrix *evec, double EigenDecomp(gsl_matrix *G, gsl_matrix *U, gsl_vector *eval, const size_t flag_largematrix); +double EigenDecomp_Zeroed(gsl_matrix *G, gsl_matrix *U, gsl_vector *eval, + const size_t flag_largematrix); double EigenDecomp(gsl_matrix_float *G, gsl_matrix_float *U, gsl_vector_float *eval, const size_t flag_largematrix); |