diff options
| author | Pjotr Prins | 2017-08-26 10:00:18 +0000 |
|---|---|---|
| committer | Pjotr Prins | 2017-08-26 10:00:18 +0000 |
| commit | be45bcca0ddc1d88066bd18a56ca57d588e41e99 (patch) | |
| tree | b1b6865a2efde7baf2cbb9f66d438a0fb36aaeff /src/io.h | |
| parent | ea21ba73273891261ba2e4d0d85729f308c54d72 (diff) | |
| download | pangemma-be45bcca0ddc1d88066bd18a56ca57d588e41e99.tar.gz | |
Debug: only output check on -debug
Diffstat (limited to 'src/io.h')
| -rw-r--r-- | src/io.h | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/src/io.h b/src/io.h index 9edc5eb..d9253e3 100644 --- a/src/io.h +++ b/src/io.h @@ -64,7 +64,7 @@ bool ReadFile_geno(const string &file_geno, const set<string> &setSnps, const double &r2_level, map<string, string> &mapRS2chr, map<string, long int> &mapRS2bp, map<string, double> &mapRS2cM, vector<SNPINFO> &snpInfo, - size_t &ns_test); + size_t &ns_test, bool debug); bool ReadFile_bed(const string &file_bed, const set<string> &setSnps, const gsl_matrix *W, vector<int> &indicator_idv, vector<int> &indicator_snp, vector<SNPINFO> &snpInfo, @@ -94,7 +94,7 @@ bool PlinkKin(const string &file_bed, vector<int> &indicator_snp, bool ReadFile_geno(const string file_geno, vector<int> &indicator_idv, vector<int> &indicator_snp, gsl_matrix *UtX, gsl_matrix *K, - const bool calc_K); + const bool calc_K, bool debug); bool ReadFile_bed(const string &file_bed, vector<int> &indicator_idv, vector<int> &indicator_snp, gsl_matrix *UtX, gsl_matrix *K, const bool calc_K); @@ -102,7 +102,7 @@ bool ReadFile_geno(const string &file_geno, vector<int> &indicator_idv, vector<int> &indicator_snp, vector<vector<unsigned char>> &Xt, gsl_matrix *K, const bool calc_K, const size_t ni_test, - const size_t ns_test); + const size_t ns_test, bool debug); bool ReadFile_bed(const string &file_bed, vector<int> &indicator_idv, vector<int> &indicator_snp, vector<vector<unsigned char>> &Xt, gsl_matrix *K, const bool calc_K, const size_t ni_test, |