diff options
author | xiangzhou | 2014-10-07 06:50:56 -0400 |
---|---|---|
committer | xiangzhou | 2014-10-07 06:50:56 -0400 |
commit | d150a16026a013edf91376213931a9d89d559713 (patch) | |
tree | 49a6238ed6201e58ad560d550b75410e210ce0cc /example/mouse_hs1940.fam | |
parent | 9aa9f76cb16a0e71fea19dd125761034aaca4fd4 (diff) | |
download | pangemma-d150a16026a013edf91376213931a9d89d559713.tar.gz |
version 0.95alpha
Diffstat (limited to 'example/mouse_hs1940.fam')
-rw-r--r-- | example/mouse_hs1940.fam | 1940 |
1 files changed, 1940 insertions, 0 deletions
diff --git a/example/mouse_hs1940.fam b/example/mouse_hs1940.fam new file mode 100644 index 0000000..1cd5056 --- /dev/null +++ b/example/mouse_hs1940.fam @@ -0,0 +1,1940 @@ +1_3 A048005080 H2.3:C5.2(3) H2.3:G2.2(3) 2 0.224991591484104 0.224991591484104 NA 1 NA -0.285427742494795 +1_5 A048006063 E5.2:H5.1(4) E5.2:D4.1(4) 1 -0.97454252753557 -0.97454252753557 NA 0 NA -2.33353176490961 +1_1 A048006555 E1.3:H1.2(3) E1.3:D1.2(3) 1 0.19590969210935 0.19590969210935 NA 1 NA 0.0468180689957051 +1_1 A048007096 D3.2:G2.1(5) D3.2:C5.1(5) 1 NA NA NA NA NA NA +1_3 A048010273 G5.2:B5.1(4) G5.2:F5.1(2) 2 NA NA NA NA NA NA +1_1 A048010371 H4.2:C5.1(4) H4.2:G1.1(7) 1 1.77506881842261 1.77506881842261 NA 1 NA NA +1_81 A048011040 G2.2:B4.1(5) G2.2:F1.1(7) 1 -1.00648068736027 -1.00648068736027 NA 0 NA -0.305314567179895 +1_5 A048011287 B4.3:E5.2(3) B4.3:A1.2(3) 1 -0.781086242107176 -0.781086242107176 NA 0 NA -1.69273285169591 +1_3 A048011567 C2.2:F3.1(5) C2.2:B5.1(4) 1 1.79252039372883 1.79252039372883 NA 1 NA -0.177824558931319 +1_3 A048013559 C5.2:F3.1(5) C5.2:B5.1(4) 2 NA NA NA NA NA NA +1_2 A048015047 B5.2:E5.1(4) B5.2:A1.1(4) 1 0.630498025349646 NA 0.630498025349646 NA 1 0.94693699308361 +1_5 A048017615 E5.2:H5.1(4) E5.2:D4.1(4) 1 NA NA NA NA NA NA +1_2 A048019267 F5.2:A1.1(4) F5.2:E2.1(5) 1 -1.7101721581167 NA -1.7101721581167 NA 0 NA +1_7 A048021023 H2.2:C3.1(4) H2.2:G3.1(3) 1 0.445403243320321 0.445403243320321 NA 1 NA 0.347146830766996 +1_7 A048022858 E2.3:H2.2(3) E2.3:D4.2(2) 2 0.20316368993191 0.20316368993191 NA 1 NA 2.47587153482305 +1_1 A048023355 H5.2:C1.1(5) H5.2:G1.1(7) 2 NA NA NA NA NA NA +1_1 A048023581 H4.2:C5.1(4) H4.2:G1.1(7) 1 NA NA NA NA NA NA +1_1 A048028854 E5.3:H5.2(6) E5.3:D3.2(5) 2 -0.335988640481819 -0.335988640481819 NA 0 NA -0.539936962168979 +1_76 A048028871 C1.3:F3.2(3) C1.3:B1.2(3) 2 -2.29061284080028 NA -2.29061284080028 NA 0 NA +1_2 A048029086 G1.3:B1.2(3) G1.3:F3.2(3) 2 NA NA NA NA NA -0.295356553332219 +1_1 A048030529 H4.2:C5.1(4) H4.2:G1.1(7) 1 NA NA NA NA NA NA +1_5 A048031067 A3.2:D2.1(5) A3.2:H4.1(5) 2 -0.107762113132544 -0.107762113132544 NA 0 NA NA +1_78 A048031101 UnknownFather3 UnknownMother3 1 0.477040428489443 0.477040428489443 NA 1 NA NA +1_2 A048031355 F3.2:A2.1(5) F3.2:E4.1(5) 2 NA NA NA NA NA NA +1_1 A048031545 D3.2:G2.1(5) D3.2:C5.1(5) 2 -0.685691288399397 -0.685691288399397 NA 0 NA 0.231291168010466 +1_1 A048031769 H4.2:C5.1(4) H4.2:G1.1(7) 1 NA NA NA NA NA NA +1_83 A048031794 D2.2:G5.1(4) D2.2:C5.1(4) 2 NA NA NA NA NA NA +1_5 A048031822 E5.2:H5.1(4) E5.2:D4.1(4) 1 -1.18461371269513 -1.18461371269513 NA 0 NA -1.39618687564041 +1_80 A048032099 C4.2:F3.1(5) C4.2:B5.1(4) 1 NA NA NA NA NA NA +1_4 A048032883 B5.3:E1.2(5) B5.3:A2.2(5) 1 NA NA NA NA NA 1.28335683670352 +1_1 A048033069 H4.2:C5.1(4) H4.2:G1.1(7) 1 NA NA NA NA NA NA +1_2 A048033354 B1.2:E3.1(5) B1.2:A1.1(4) 2 NA NA NA NA NA NA +1_8 A048033618 C3.2:F5.1(1) C3.2:B2.1(5) 1 NA NA NA NA NA NA +1_8 A048034836 C3.2:F5.1(1) C3.2:B2.1(5) 1 NA NA NA NA NA NA +1_2 A048035291 B2.2:E1.1(6) B2.2:A2.1(5) 2 -0.9688418277938 NA -0.9688418277938 NA 0 -0.413672562030951 +1_82 A048035543 A5.2:D2.1(5) A5.2:H4.1(5) 1 NA NA NA NA NA -1.16273580735885 +1_2 A048035553 G4.3:B5.2(3) G4.3:F2.2(3) 2 1.19544069584784 NA 1.19544069584784 NA 1 NA +1_1 A048035776 E1.3:H1.2(3) E1.3:D1.2(3) 2 NA NA NA NA NA 1.3633100686421 +1_3 A048036063 H2.3:C5.2(3) H2.3:G2.2(3) 1 -0.307903150582881 -0.307903150582881 NA 0 NA -0.645884080137785 +1_7 A048036259 H2.2:C3.1(4) H2.2:G3.1(3) 2 0.558364154775849 0.558364154775849 NA 1 NA -0.0372907703658653 +1_5 A048037297 E5.2:H5.1(4) E5.2:D4.1(4) 1 NA NA NA NA NA NA +1_2 A048038018 F3.2:A2.1(5) F3.2:E4.1(5) 2 NA NA NA NA NA NA +1_2 A048039054 F2.2:A1.1(4) F2.2:E2.1(5) 1 -1.35575446107921 NA -1.35575446107921 NA 0 NA +1_2 A048040045 C2.3:F2.2(3) C2.3:B2.2(3) 2 0.550072710193054 NA 0.550072710193054 NA 1 0.593970796595253 +1_4 A048040526 B2.3:E3.2(3) B2.3:A4.2(3) 2 NA NA NA NA NA -1.58357204698067 +1_3 A048041122 G5.2:B5.1(4) G5.2:F5.1(2) 2 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F1.3:A1.2(3) F1.3:E2.2(3) 2 -0.690196026222781 -0.690196026222781 NA 0 NA NA +1_2 A048047298 F5.2:A1.1(4) F5.2:E2.1(5) 1 -1.22879430803663 NA -1.22879430803663 NA 0 -0.565815825402797 +1_2 A048048118 C2.3:F2.2(3) C2.3:B2.2(3) 2 1.7665419834786 NA 1.7665419834786 NA 1 -0.187503572665011 +1_3 A048050779 G3.2:B5.1(4) G3.2:F5.1(2) 2 2.03506859300615 2.03506859300615 NA 1 NA -1.18485204842994 +1_5 A048050833 A3.2:D2.1(5) A3.2:H4.1(5) 1 0.326598429936684 0.326598429936684 NA 1 NA NA +1_2 A048051064 B5.2:E5.1(4) B5.2:A1.1(4) 1 NA NA NA NA NA 2.12550732156636 +1_3 A048051824 UnknownFather5 C1.2:B2.1(5) 1 NA NA NA NA NA NA +1_82 A048052595 A5.2:D2.1(5) A5.2:H4.1(5) 1 NA NA NA NA NA -0.966999459630137 +1_2 A048053604 F3.2:A2.1(5) F3.2:E4.1(5) 2 NA NA NA NA NA NA +1_83 A048053821 D2.2:G5.1(4) D2.2:C5.1(4) 2 NA NA NA NA NA NA +1_4 A048053860 A2.2:D1.1(4) A2.2:H5.1(4) 2 NA NA NA NA NA NA +1_5 A048054628 E2.2:H2.1(2) E2.2:D1.1(6) 2 -0.30417718205564 -0.30417718205564 NA 0 NA 0.367439597909701 +1_2 A048054885 F1.2:A1.1(4) F1.2:E2.1(5) 2 NA NA NA NA NA NA +1_80 A048055081 C4.2:F3.1(5) C4.2:B5.1(4) 2 NA NA NA NA NA NA +1_2 A048055545 G4.3:B5.2(3) G4.3:F2.2(3) 2 1.4308183956064 NA 1.4308183956064 NA 1 NA +1_78 A048055872 UnknownFather3 UnknownMother3 1 -0.0649334966965995 -0.0649334966965995 NA 0 NA NA +1_3 A048056266 H2.3:C5.2(3) H2.3:G2.2(3) 1 -0.0293370917560526 -0.0293370917560526 NA 0 NA 0.759642421799446 +1_2 A048056786 B2.2:E1.1(6) B2.2:A2.1(5) 2 -1.59851199519026 NA -1.59851199519026 NA 0 -0.820334723796644 +1_5 A048057565 B4.3:E5.2(3) B4.3:A1.2(3) 2 -0.0631520964679067 -0.0631520964679067 NA 0 NA -1.06257510089642 +1_76 A048057587 C1.3:F3.2(3) C1.3:B1.2(3) 2 NA NA NA NA NA NA +1_6 A048057608 A2.3:D5.2(3) A2.3:H3.2(3) 1 -0.541818911050285 -0.541818911050285 NA 0 NA NA +1_4 A048057823 A2.2:D1.1(4) A2.2:H5.1(4) 1 NA NA NA NA NA NA +1_3 A048057883 C2.2:F3.1(5) C2.2:B5.1(4) 1 NA NA NA NA NA NA +1_1 A048058059 H5.2:C1.1(5) H5.2:G1.1(7) 1 NA NA NA NA NA NA +1_8 A048058070 C3.2:F5.1(1) C3.2:B2.1(5) 1 NA NA NA NA NA NA +1_3 A048058554 H2.3:C5.2(3) H2.3:G2.2(3) 2 NA NA NA NA NA 1.1721440163989 +1_1 A048058769 E1.3:H1.2(3) E1.3:D1.2(3) 1 1.57966154274531 1.57966154274531 NA 1 NA 0.382758635462562 +1_7 A048058856 E2.3:H2.2(3) E2.3:D4.2(2) 2 -0.334108253324302 -0.334108253324302 NA 0 NA 0.508989628885774 +1_2 A048058878 B1.2:E3.1(5) B1.2:A1.1(4) 2 NA NA NA NA NA NA +1_2 A048059097 F5.2:A1.1(4) F5.2:E2.1(5) 1 -0.453269614500834 NA -0.453269614500834 NA 0 NA +1_82 A048059117 A5.2:D2.1(5) A5.2:H4.1(5) 1 0.10955038917491 0.10955038917491 NA 1 NA NA +1_1 A048059602 H4.2:C5.1(4) H4.2:G1.1(7) 1 NA NA NA NA NA NA +1_2 A048059836 F3.2:A2.1(5) F3.2:E4.1(5) 2 NA NA NA NA NA NA +1_2 A048060314 G4.3:B5.2(3) G4.3:F2.2(3) 1 NA NA NA NA NA NA +1_2 A048061051 F5.2:A1.1(4) F5.2:E2.1(5) 1 -1.17392384143832 NA -1.17392384143832 NA 0 NA +1_2 A048061341 B5.2:E5.1(4) B5.2:A1.1(4) 1 1.44582265406998 NA 1.44582265406998 NA 1 0.91031155229098 +1_55 A048061513 F3.3:A2.2(5) F3.3:E1.2(4) 1 0.687941912287913 NA 0.687941912287913 NA 1 0.898371844501957 +1_3 A048061517 H2.3:C5.2(3) H2.3:G2.2(3) 2 0.377672688839601 0.377672688839601 NA 1 NA -0.984878929578496 +1_7 A048061864 H2.2:C3.1(4) H2.2:G3.1(3) 1 NA NA NA NA NA NA +1_1 A048062325 E5.3:H5.2(6) E5.3:D3.2(5) 1 0.525420680633878 0.525420680633878 NA 1 NA -0.3454623165578 +1_5 A048063019 F1.3:A1.2(3) F1.3:E2.2(3) 2 0.535652725737822 0.535652725737822 NA 1 NA NA +1_1 A048063276 D3.2:G2.1(5) D3.2:C5.1(5) 1 0.13462572466767 0.13462572466767 NA 1 NA 0.348832330613017 +1_3 A048063277 H2.3:C5.2(3) H2.3:G2.2(3) 2 -0.431702779790153 -0.431702779790153 NA 0 NA -0.609180108884697 +1_3 A048063778 G3.2:B5.1(4) G3.2:F5.1(2) 2 NA NA NA NA NA NA +1_1 A048064308 H4.2:C5.1(4) H4.2:G1.1(7) 2 -0.0845437580298249 -0.0845437580298249 NA 0 NA -1.89876837726218 +1_1 A048064620 H4.2:C5.1(4) H4.2:G1.1(7) 2 0.00266662898443208 0.00266662898443208 NA 1 NA 0.0309411712791953 +1_4 A048064819 B3.3:E1.2(3) B3.3:A2.2(3) 2 1.50383400338454 NA 1.50383400338454 NA 1 0.315302949752284 +1_4 A048065035 B2.3:E3.2(3) B2.3:A4.2(3) 2 NA NA NA NA NA 0.0452299141071603 +1_7 A048066343 H2.2:C3.1(4) H2.2:G3.1(3) 1 NA NA NA NA NA NA +1_3 A048066372 G5.2:B5.1(4) G5.2:F5.1(2) 1 -0.604682360331493 -0.604682360331493 NA 0 NA NA +1_2 A048066594 F3.2:A2.1(5) F3.2:E4.1(5) 1 0.802980828523762 NA 0.802980828523762 NA 1 -0.592079328787913 +1_7 A048067278 E2.3:H2.2(3) E2.3:D4.2(2) 2 NA NA NA NA NA 1.52011922882851 +1_2 A048067524 F5.2:A1.1(4) F5.2:E2.1(5) 1 NA NA NA NA NA 0.193965965131739 +1_5 A048067529 A1.2:D4.1(4) A1.2:H5.1(4) 1 NA NA NA NA NA NA +1_2 A048067791 F3.2:A2.1(5) F3.2:E4.1(5) 1 0.154386541782591 NA 0.154386541782591 NA 1 0.384466242575699 +1_1 A048067887 H4.2:C5.1(4) H4.2:G1.1(7) 2 1.06420897408798 1.06420897408798 NA 1 NA -0.81590064708757 +1_5 A048068026 A3.2:D2.1(5) A3.2:H4.1(5) 2 0.624005286173478 0.624005286173478 NA 1 NA NA +1_7 A048068077 E2.3:H2.2(3) E2.3:D4.2(2) 2 1.04253626611962 1.04253626611962 NA 1 NA -0.586417574915146 +1_55 A048068368 F3.3:A2.2(5) F3.3:E1.2(4) 1 0.517274518901092 NA 0.517274518901092 NA 1 -0.41021863840328 +1_1 A048069001 E1.3:H1.2(3) E1.3:D1.2(3) 1 0.575063685052758 0.575063685052758 NA 1 NA 0.203674852652108 +1_1 A048069049 D1.2:G1.1(6) D1.2:C3.1(4) 2 -0.606818105522709 -0.606818105522709 NA 0 NA NA +1_5 A048069514 A3.2:D2.1(5) A3.2:H4.1(5) 2 NA NA NA NA NA NA +1_84 A048070376 UnknownFather4 UnknownMother4 2 0.412269578252236 NA 0.412269578252236 NA 1 NA +1_5 A048071106 E5.2:H5.1(4) E5.2:D4.1(4) 1 -1.37838287973985 -1.37838287973985 NA 0 NA -0.949423892669249 +1_2 A048071579 C2.3:F2.2(3) C2.3:B2.2(3) 2 NA NA NA NA NA 0.139265303657148 +1_7 A048072087 D4.2:G1.1(6) D4.2:C1.1(7) 2 -0.594044620289919 -0.594044620289919 NA 0 NA NA +1_3 A048072266 G5.2:B5.1(4) G5.2:F5.1(2) 2 NA NA NA NA NA NA +1_4 A048072521 B2.3:E3.2(3) B2.3:A4.2(3) 2 0.790770351426836 NA 0.790770351426836 NA 1 0.0404661177951859 +1_3 A048072595 H3.3:C5.2(4) H3.3:G5.2(3) 2 -0.296737838259898 -0.296737838259898 NA 0 NA 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