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authorPjotr Prins2020-05-22 11:21:45 -0500
committerPjotr Prins2020-05-22 11:21:45 -0500
commitf1cd914e6f20c9a162e16d7283477c1b98d005d1 (patch)
tree0a23068f9b06525ded025450c209b3a1dcf94b38 /INSTALL.md
parent862ace03212ed17bdc1ab349bfab55543720a980 (diff)
parentb309569fe9497befa008ac2d2cbc04f2e861ce76 (diff)
downloadpangemma-f1cd914e6f20c9a162e16d7283477c1b98d005d1.tar.gz
Merge branch 'master' of github.com:genenetwork/GEMMA
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diff --git a/INSTALL.md b/INSTALL.md
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@@ -17,7 +17,6 @@ dependencies:
* GNU Science library (GSL) 1.x (GEMMA does not currently work with GSL >= 2).
* blas/openblas
* lapack
-* [Eigen3 library](http://eigen.tuxfamily.org/dox/)
* zlib
See below for installation on Guix.
@@ -51,10 +50,16 @@ using the following command
To build GEMMA from source you can opt to install the build tools with GNU Guix
- guix package -i make gcc linux-libre-headers gsl eigen openblas lapack glibc ld-wrapper
+ guix package -i make gcc linux-libre-headers gsl openblas lapack glibc ld-wrapper
+
+The current build container is
+
+ guix environment -C guix --ad-hoc gcc-toolchain gdb gsl openblas zlib bash ld-wrapper perl vim
### Install from source
+Note: Eigen is no longer required!
+
Install listed dependencies and run
make -j 4