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authorPjotr Prins2017-08-27 08:57:15 +0200
committerGitHub2017-08-27 08:57:15 +0200
commit523275386b5644a20be6a309d54d9497029462db (patch)
treeee7fe2693b3174328e46a22454edeb9e64cfc021 /INSTALL.md
parent2554242d10b9a7b58bd6c7df82a10e747b6cc0eb (diff)
parenta1984edf45653c46ff430de3958449459532cb6f (diff)
downloadpangemma-523275386b5644a20be6a309d54d9497029462db.tar.gz
Merge pull request #79 from genenetwork/issue78
Issue78
Diffstat (limited to 'INSTALL.md')
-rw-r--r--INSTALL.md3
1 files changed, 3 insertions, 0 deletions
diff --git a/INSTALL.md b/INSTALL.md
index 6f7f200..864b8e7 100644
--- a/INSTALL.md
+++ b/INSTALL.md
@@ -82,6 +82,9 @@ You can run gemma in the debugger with, for example
-p example/mouse_hs1940.pheno.txt -a example/mouse_hs1940.anno.txt \
-snps example/snps.txt -nind 400 -loco 1 -gk -debug -o myoutput
+Note that if you get <optimized out> warnings on inspecting variables you
+should compile with GCC_FLAGS="" to disable optimizations (-O3).
+
Other options, such as compiling with warnings, are listed in the
Makefile.